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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 10 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proteasome complex 2.4582E-22 10 48 10 6292
proteasome accessory complex 3.6223E-19 10 23 8 6292
proteasome regulatory particle 3.6223E-19 10 23 8 6292
proteasome regulatory particle, lid subcomplex 7.7142E-13 10 10 5 6292
protein complex 3.5941E-8 10 1137 10 6292
proteasome regulatory particle, base subcomplex 2.417E-7 10 9 3 6292
macromolecular complex 1.3754E-6 10 1635 10 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein catabolic process 4.7278E-16 10 189 10 6292
ubiquitin-dependent protein catabolic process 2.7553E-14 10 156 9 6292
modification-dependent protein catabolic process 2.7553E-14 10 156 9 6292
proteolysis involved in cellular protein catabolic process 3.284E-14 10 159 9 6292
macromolecule catabolic process 4.2805E-14 10 294 10 6292
modification-dependent macromolecule catabolic process 4.3672E-14 10 164 9 6292
cellular protein catabolic process 6.4146E-14 10 171 9 6292
proteolysis 1.5314E-13 10 188 9 6292
cellular macromolecule catabolic process 3.5216E-12 10 265 9 6292
catabolic process 8.5189E-12 10 496 10 6292
cellular catabolic process 2.0505E-10 10 415 9 6292
protein metabolic process 3.5625E-8 10 1136 10 6292
cellular protein metabolic process 1.0138E-6 10 1074 9 6292
macromolecule metabolic process 5.1966E-5 10 2349 10 6292
primary metabolic process 4.2311E-4 10 2896 10 6292
cellular macromolecule metabolic process 7.3309E-4 10 2285 9 6292
metabolic process 1.0041E-3 10 3157 10 6292
cellular metabolic process 7.9165E-3 10 3033 9 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endopeptidase activity 9.4018E-9 10 54 5 6292
peptidase activity, acting on L-amino acid peptides 1.676E-7 10 95 5 6292
peptidase activity 5.5901E-6 10 192 5 6292
hydrolase activity 8.4227E-3 10 911 5 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle