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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 17 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
BMS1
  • nucleus
  • cytoplasm
  • mitochondrion
  • nuclear outer membrane
  • nucleolus
  • ribosome assembly
  • rRNA processing
  • GTP binding
  • ECM16
  • mitochondrion
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • RNA helicase activity
  • EMG1
  • nucleus
  • cytoplasm
  • nuclear microtubule
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • ribosomal small subunit biogenesis
  • ribosome biogenesis
  • molecular_function
  • ENP1
  • nucleus
  • nuclear outer membrane
  • nucleolus
  • preribosome, small subunit precursor
  • ribosome biogenesis
  • rRNA processing
  • snoRNA binding
  • KRE33
  • nucleolus
  • ribosome biogenesis
  • molecular_function
  • MPP10
  • nucleus
  • small-subunit processome
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • molecular_function
  • NAN1
  • RENT complex
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • snoRNA binding
  • NOC4
  • nucleus
  • Noc4p-Nop14p complex
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • ribosomal small subunit biogenesis
  • ribosome biogenesis
  • molecular_function
  • NOP1
  • nuclear outer membrane
  • nucleolus
  • ribosome
  • small nucleolar ribonucleoprotein complex
  • rRNA modification
  • RNA methylation
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • ribosomal large subunit assembly
  • snoRNA 3'-end processing
  • methyltransferase activity
  • NOP14
  • mitochondrion
  • Noc4p-Nop14p complex
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • ribosomal small subunit biogenesis
  • ribosome biogenesis
  • snoRNA binding
  • RRP12
  • nucleus
  • ribosome
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • molecular_function
  • UTP10
  • mitochondrion
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • snoRNA binding
  • UTP15
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • snoRNA binding
  • UTP20
  • cytoplasm
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosome biogenesis
  • endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • rRNA processing
  • snoRNA binding
  • UTP22
  • nucleus
  • nuclear outer membrane
  • nucleolus
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosome biogenesis
  • rRNA processing
  • snoRNA binding
  • UTP7
  • nuclear outer membrane
  • small nucleolar ribonucleoprotein complex
  • ribosome biogenesis
  • rRNA processing
  • snoRNA binding
  • UTP8
  • small nucleolar ribonucleoprotein complex
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • snoRNA binding
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    small nucleolar ribonucleoprotein complex 4.2409E-23 17 72 13 6292
    nuclear outer membrane 2.3952E-15 17 86 10 6292
    ribonucleoprotein complex 4.6406E-15 17 514 15 6292
    nucleolus 7.9285E-15 17 211 12 6292
    nuclear membrane 8.4119E-15 17 97 10 6292
    outer membrane 4.1849E-12 17 178 10 6292
    organelle outer membrane 4.1849E-12 17 178 10 6292
    nuclear envelope 1.2839E-11 17 199 10 6292
    nuclear membrane-endoplasmic reticulum network 5.9475E-11 17 232 10 6292
    nuclear lumen 7.4913E-11 17 453 12 6292
    organelle lumen 6.0864E-9 17 660 12 6292
    intracellular organelle lumen 6.0864E-9 17 660 12 6292
    endomembrane system 1.1966E-8 17 398 10 6292
    membrane-enclosed lumen 1.2006E-8 17 700 12 6292
    non-membrane-bounded organelle 2.9132E-8 17 959 13 6292
    intracellular non-membrane-bounded organelle 2.9132E-8 17 959 13 6292
    envelope 1.1816E-7 17 505 10 6292
    organelle envelope 1.1816E-7 17 505 10 6292
    macromolecular complex 1.2396E-7 17 1635 15 6292
    nuclear part 1.6422E-7 17 1103 13 6292
    preribosome, small subunit precursor 3.261E-7 17 6 3 6292
    membrane part 1.5221E-6 17 662 10 6292
    preribosome 1.6097E-6 17 34 4 6292
    organelle membrane 2.2997E-6 17 692 10 6292
    Noc4p-Nop14p complex 6.8716E-6 17 2 2 6292
    nucleus 3.2207E-5 17 2041 14 6292
    Noc complex 6.8389E-5 17 5 2 6292
    nucleolar part 2.1677E-4 17 45 3 6292
    membrane 3.1767E-4 17 1198 10 6292
    intracellular organelle part 8.5928E-4 17 2282 13 6292
    organelle part 8.5928E-4 17 2282 13 6292
    90S preribosome 9.1252E-4 17 17 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    ribosome biogenesis 2.6351E-22 17 346 17 6292
    rRNA processing 6.5193E-22 17 128 14 6292
    ribonucleoprotein complex biogenesis 1.0198E-21 17 374 17 6292
    rRNA metabolic process 1.7675E-21 17 137 14 6292
    maturation of SSU-rRNA 2.1852E-19 17 59 11 6292
    ncRNA processing 1.2094E-18 17 215 14 6292
    ncRNA metabolic process 1.55E-17 17 257 14 6292
    cellular component biogenesis 4.4392E-17 17 694 17 6292
    RNA processing 3.9317E-15 17 380 14 6292
    RNA metabolic process 1.3546E-9 17 954 14 6292
    gene expression 7.3773E-8 17 1283 14 6292
    nucleic acid metabolic process 2.7189E-7 17 1415 14 6292
    nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 1.0381E-6 17 1566 14 6292
    cellular nitrogen compound metabolic process 5.1462E-6 17 1770 14 6292
    nitrogen compound metabolic process 5.9975E-6 17 1791 14 6292
    ribosomal small subunit biogenesis 4.1E-5 17 26 3 6292
    cellular macromolecule metabolic process 1.3415E-4 17 2285 14 6292
    macromolecule metabolic process 1.8936E-4 17 2349 14 6292
    maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5.2669E-4 17 13 2 6292
    primary metabolic process 2.4078E-3 17 2896 14 6292
    cellular process 2.5051E-3 17 4426 17 6292
    cellular metabolic process 4.1361E-3 17 3033 14 6292
    metabolic process 6.562E-3 17 3157 14 6292
    ncRNA 5'-end processing 8.0849E-3 17 3 1 6292
    endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 8.0849E-3 17 3 1 6292
    endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 8.0849E-3 17 3 1 6292
    rRNA 5'-end processing 8.0849E-3 17 3 1 6292
    RNA 5'-end processing 8.0849E-3 17 3 1 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    snoRNA binding 1.1284E-17 17 31 9 6292
    RNA binding 1.1366E-7 17 367 9 6292
    nucleic acid binding 1.7565E-5 17 666 9 6292
    binding 6.1269E-4 17 1294 10 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle