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Protein Overview: PEP5

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run VAM3 sample: hx3 Hao Xu, et al. (2010)
View Run VAM3 Sample: HX11 - both fusion and trans-SNARE complex formation take place. Hao Xu, et al. (2010)
View Run VAM3 Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). Hao Xu, et al. (2010)
View Run VAM3 Sample: HX13 - trans-SNARE complex forms but fusion is blocked. Hao Xu, et al. (2010)
View Run VAM3 Sample: HX14 - mixture in detergent (control). Hao Xu, et al. (2010)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run None Entered #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data PEP5 Huh WK, et al. (2003)
View Data PEP5 and SNF7 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..377] deduced N/A No confident structure predictions are available.
2 View Details [378..635] Pfam 21.136677 Region in Clathrin and VPS No confident structure predictions are available.
3 View Details [636..865] deduced N/A No confident structure predictions are available.
4 View Details [866..1029] PSI-BLAST 2.69897 bard1 RING domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 3.27972671455235 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 3.00024678477589 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 2.09205299847945 bayes_pls_golite062009
  • binding
  • 1.75605065075676 bayes_pls_golite062009
  • transporter activity
  • 1.23232041140488 bayes_pls_golite062009
  • protein binding
  • 1.04520986427713 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.750051725890322 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.450377149626952 bayes_pls_golite062009
  • kinase activity
  • 0.41337453952205 bayes_pls_golite062009
  • hydrolase activity
  • 0.346903609858078 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.271959658140432 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.260136536525518 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 0.190416660410399 bayes_pls_golite062009
  • nucleic acid binding
  • 0.103339839445939 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.0245411309982146 bayes_pls_golite062009
    2
    Term Confidence Notes
  • protein transporter activity
  • 2.99345877012947 bayes_pls_golite062009
  • transporter activity
  • 2.3766833486706 bayes_pls_golite062009
  • binding
  • 2.33303322187387 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 2.12926593993985 bayes_pls_golite062009
  • protein binding
  • 1.5114863464349 bayes_pls_golite062009
  • transmembrane transporter activity
  • 1.2724388835449 bayes_pls_golite062009
  • protein transmembrane transporter activity
  • 1.12112006227201 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 1.04982314606251 bayes_pls_golite062009
  • hydrolase activity
  • 0.566325388018401 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.535131417738445 bayes_pls_golite062009
  • kinase activity
  • 0.507502362811171 bayes_pls_golite062009
  • nucleic acid binding
  • 0.497783403092344 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.416234300339629 bayes_pls_golite062009
  • signal sequence binding
  • 0.279693431859311 bayes_pls_golite062009
  • active transmembrane transporter activity
  • 0.260663498540354 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 0.256036243669218 bayes_pls_golite062009
  • transferase activity
  • 0.249515205994519 bayes_pls_golite062009
  • primary active transmembrane transporter activity
  • 0.234271600707329 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
  • 0.225395946682209 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
  • 0.186601655036333 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
  • 0.183072614802483 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
  • 0.182751938544977 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.109435859778099 bayes_pls_golite062009
  • clathrin binding
  • 0.0923079381755934 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.0728493557966827 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.0641324729536009 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.0615190129942244 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 0.0475280280823402 bayes_pls_golite062009
  • protein kinase activity
  • 0.0308998889737299 bayes_pls_golite062009
    3
    Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 5.97121728620188 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 5.78935175140238 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 4.75377804653841 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 2.57382484274962 bayes_pls_golite062009
  • binding
  • 2.15929427993458 bayes_pls_golite062009
  • protein binding
  • 1.49775478023418 bayes_pls_golite062009
  • SUMO polymer binding
  • 0.805553743681771 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 0.786612602432575 bayes_pls_golite062009
  • ligase activity
  • 0.63517530468004 bayes_pls_golite062009
  • hydrolase activity
  • 0.626901453756812 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 0.549461161056205 bayes_pls_golite062009
  • cysteine-type peptidase activity
  • 0.159023519781458 bayes_pls_golite062009
  • catalytic activity
  • 0.14112008370434 bayes_pls_golite062009
  • nucleic acid binding
  • 0.125491277540945 bayes_pls_golite062009
  • transcription regulator activity
  • 0.0833655277418337 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle