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Protein Overview: VPS8

Protein Complex Data

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data VPS8 Huh WK, et al. (2003)
View Data VPS8 and SNF7 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..450] PSI-BLAST 40.69897 Actin interacting protein 1
2 View Details [451..638] deduced N/A No confident structure predictions are available.
3 View Details [639..772] deduced N/A No confident structure predictions are available.
4 View Details [773..1091] PSI-BLAST 13.30103 Clathrin heavy chain proximal leg segment
5 View Details [1092..1190] deduced N/A No confident structure predictions are available.
6 View Details [1191..1274] MSA 3.657997 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 1.8484919978091 bayes_pls_golite062009
  • protein binding
  • 1.42618832381942 bayes_pls_golite062009
  • transporter activity
  • 1.21549336905926 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.734793983890004 bayes_pls_golite062009
  • hydrolase activity
  • 0.36638536879917 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.359536347486199 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00585398682921312 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6
    Term Confidence Notes
  • binding
  • 2.13191655110108 bayes_pls_golite062009
  • protein binding
  • 1.69332800381364 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 1.19185232032795 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 1.18697373227452 bayes_pls_golite062009
  • hydrolase activity
  • 0.737434311410924 bayes_pls_golite062009
  • catalytic activity
  • 0.168711389690753 bayes_pls_golite062009
  • peptidase activity
  • 0.0046487386791938 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle