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Protein Overview: RAD51

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #31 Asynchronous Prep (Protease cleavage) Keck JM, et al. (2011)
View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RAD51 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..126] PSI-BLAST 311.69897 DNA repair protein Rad51, N-terminal domain
2 View Details [127..400] PSI-BLAST 151.154902 RecA protein, ATPase-domain; RecA protein, C-terminal domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • DNA-dependent ATPase activity
  • 6.08870471440355 bayes_pls_golite062009
  • DNA helicase activity
  • 5.90932638467326 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 5.45262775532714 bayes_pls_golite062009
  • helicase activity
  • 4.28397455986496 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 3.663510450664 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 3.663510450664 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 2.65328018648613 bayes_pls_golite062009
  • ATPase activity, coupled
  • 2.62906136657082 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.58149479936199 bayes_pls_golite062009
  • hydrolase activity
  • 2.5712103536265 bayes_pls_golite062009
  • ATPase activity
  • 2.56628820450144 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 2.56034830999299 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 2.56013654932837 bayes_pls_golite062009
  • binding
  • 1.9180887037845 bayes_pls_golite062009
  • nucleic acid binding
  • 1.9087142423581 bayes_pls_golite062009
  • DNA binding
  • 1.87185414119548 bayes_pls_golite062009
  • catalytic activity
  • 1.58067730905989 bayes_pls_golite062009
  • protein binding
  • 1.45202848418786 bayes_pls_golite062009
    2
    Term Confidence Notes
  • DNA clamp loader activity
  • 3.22518920754305 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
  • 3.19273435123154 bayes_pls_golite062009
  • transporter activity
  • 3.13325129560423 bayes_pls_golite062009
  • transmembrane transporter activity
  • 2.92327745911863 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 2.72462789867829 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 2.66107861968804 bayes_pls_golite062009
  • binding
  • 2.64537357529343 bayes_pls_golite062009
  • bubble DNA binding
  • 2.62179925837003 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 2.36915495988847 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.29436982996465 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
  • 2.29320453203372 bayes_pls_golite062009
  • DNA helicase activity
  • 2.2817164193758 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 2.27303683020046 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 2.27190707957159 bayes_pls_golite062009
  • DNA polymerase activity
  • 2.24959734952703 bayes_pls_golite062009
  • nucleic acid binding
  • 2.21184938313192 bayes_pls_golite062009
  • hydrolase activity
  • 2.18454736627863 bayes_pls_golite062009
  • double-strand/single-strand DNA junction binding
  • 2.02697209084624 bayes_pls_golite062009
  • telomeric DNA binding
  • 1.98044285764127 bayes_pls_golite062009
  • DNA binding
  • 1.94055378599526 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 1.88455339138556 bayes_pls_golite062009
  • transcription regulator activity
  • 1.83584389083042 bayes_pls_golite062009
  • ATPase activity
  • 1.76238574289941 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 1.72529279238106 bayes_pls_golite062009
  • helicase activity
  • 1.70242731830224 bayes_pls_golite062009
  • microtubule motor activity
  • 1.6537049553461 bayes_pls_golite062009
  • ATPase activity, coupled
  • 1.57826779898847 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 1.37694050923424 bayes_pls_golite062009
  • motor activity
  • 1.34881124154297 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.2539059700735 bayes_pls_golite062009
  • protein transporter activity
  • 1.25342367751911 bayes_pls_golite062009
  • protein binding
  • 1.22129154759482 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.117585097627 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • single-stranded telomeric DNA binding
  • 0.847538346941812 bayes_pls_golite062009
  • double-stranded telomeric DNA binding
  • 0.75018916645383 bayes_pls_golite062009
  • transcription activator activity
  • 0.739301862805678 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.725611289205392 bayes_pls_golite062009
  • nucleotide binding
  • 0.717697610309727 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.713814218071151 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.713752628021599 bayes_pls_golite062009
  • transcription factor activity
  • 0.697256579145077 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.568457189190858 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 0.560681051761979 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.500462538667228 bayes_pls_golite062009
  • recombinase activity
  • 0.45851158693664 bayes_pls_golite062009
  • GTPase activity
  • 0.437665353870877 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.367559137329714 bayes_pls_golite062009
  • RNA helicase activity
  • 0.34746349346164 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
  • 0.328186246219424 bayes_pls_golite062009
  • histone acetyltransferase activity
  • 0.328186246219424 bayes_pls_golite062009
  • centromeric DNA binding
  • 0.322818640526369 bayes_pls_golite062009
  • mismatched DNA binding
  • 0.31144582840038 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
  • 0.30832907234141 bayes_pls_golite062009
  • guanyl nucleotide binding
  • 0.296406132096546 bayes_pls_golite062009
  • GTP binding
  • 0.295705904888768 bayes_pls_golite062009
  • RNA-dependent ATPase activity
  • 0.29532978396745 bayes_pls_golite062009
  • guanyl ribonucleotide binding
  • 0.29028316917561 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
  • 0.248710418805919 bayes_pls_golite062009
  • structural constituent of ribosome
  • 0.208665086324262 bayes_pls_golite062009
  • ATP binding
  • 0.19169045543599 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 0.165732470448462 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 0.162060759063149 bayes_pls_golite062009
  • active transmembrane transporter activity
  • 0.114463153989353 bayes_pls_golite062009
  • microfilament motor activity
  • 0.10236059675512 bayes_pls_golite062009
  • 3'-5' DNA helicase activity
  • 0.0769112340058804 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 0.0704128024645565 bayes_pls_golite062009
  • protein transmembrane transporter activity
  • 0.0378638259240902 bayes_pls_golite062009
  • actin binding
  • 0.00482938540552702 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle