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Protein Overview: RAD54

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run MLP2 #20 Asynchronous Prep1-TiO2 Phosphopeptide enrichment, PartB Keck JM, et al. (2011)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RAD54 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..223] MSA 1.238994 View MSA. No confident structure predictions are available.
2 View Details [224..275] ORFEUS 13.09 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
3 View Details [276..583] ORFEUS 13.09 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
4 View Details [584..640] PSI-BLAST 8.221849 Putative DEAD box RNA helicase
5 View Details [641..898] PSI-BLAST 7.045757 Nucleotide excision repair enzyme UvrB

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • transcription repressor activity
  • 3.46705970365511 bayes_pls_golite062009
  • transcription regulator activity
  • 3.2394894333307 bayes_pls_golite062009
  • binding
  • 3.06758476214113 bayes_pls_golite062009
  • chromatin binding
  • 2.9265077396229 bayes_pls_golite062009
  • histone binding
  • 2.00388175060339 bayes_pls_golite062009
  • nucleic acid binding
  • 1.7870619298179 bayes_pls_golite062009
  • DNA binding
  • 1.72304410722296 bayes_pls_golite062009
  • protein binding
  • 1.61683263008775 bayes_pls_golite062009
  • methylated histone residue binding
  • 1.03331560428208 bayes_pls_golite062009
  • general transcriptional repressor activity
  • 0.49996033797134 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.356338632175355 bayes_pls_golite062009
  • satellite DNA binding
  • 0.327386416436959 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.309377712814897 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.296839540568239 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.29636000593974 bayes_pls_golite062009
  • catalytic activity
  • 0.14067200158938 bayes_pls_golite062009
    3
    Term Confidence Notes
  • microtubule motor activity
  • 3.4297361345158 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 3.0989886302218 bayes_pls_golite062009
  • pyrophosphatase activity
  • 3.01886747063507 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 2.99763530427224 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 2.99650240285889 bayes_pls_golite062009
  • binding
  • 2.64537357529343 bayes_pls_golite062009
  • motor activity
  • 2.60481158518321 bayes_pls_golite062009
  • nucleic acid binding
  • 2.11222585187695 bayes_pls_golite062009
  • DNA binding
  • 1.7904783386531 bayes_pls_golite062009
  • hydrolase activity
  • 1.77231681433173 bayes_pls_golite062009
  • ATPase activity
  • 1.76238574289941 bayes_pls_golite062009
  • transcription regulator activity
  • 1.68903321260301 bayes_pls_golite062009
  • ATPase activity, coupled
  • 1.57826779898847 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 1.50574672650697 bayes_pls_golite062009
  • structural constituent of ribosome
  • 1.47858140861683 bayes_pls_golite062009
  • microfilament motor activity
  • 1.28029120876672 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.2155186842031 bayes_pls_golite062009
  • helicase activity
  • 1.16085745407703 bayes_pls_golite062009
  • tubulin binding
  • 1.01673904002272 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • microtubule binding
  • 0.902404986889887 bayes_pls_golite062009
  • actin binding
  • 0.875514430441177 bayes_pls_golite062009
  • structural molecule activity
  • 0.86514677273731 bayes_pls_golite062009
  • plus-end-directed microtubule motor activity
  • 0.773586048423911 bayes_pls_golite062009
  • DNA helicase activity
  • 0.72881469450553 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.725611289205392 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.720649395550746 bayes_pls_golite062009
  • nucleotide binding
  • 0.717697610309727 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.713814218071151 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.713752628021599 bayes_pls_golite062009
  • transcription factor activity
  • 0.603758349693077 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 0.59513742813869 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 0.59513742813869 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.58862275163252 bayes_pls_golite062009
  • structural constituent of muscle
  • 0.559419947521782 bayes_pls_golite062009
  • telomeric DNA binding
  • 0.40354211833657 bayes_pls_golite062009
  • transcription repressor activity
  • 0.244736544804496 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 0.22150712609541 bayes_pls_golite062009
  • ATP binding
  • 0.19169045543599 bayes_pls_golite062009
  • protein binding
  • 0.170837278876362 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 0.165732470448462 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 0.162060759063149 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.144154288308693 bayes_pls_golite062009
  • active transmembrane transporter activity
  • 0.114463153989353 bayes_pls_golite062009
  • GTPase activity
  • 0.105546189348878 bayes_pls_golite062009
  • guanyl nucleotide binding
  • 0.0289841199143713 bayes_pls_golite062009
  • translation regulator activity
  • 0.0269721463618237 bayes_pls_golite062009
  • guanyl ribonucleotide binding
  • 0.0187537754688351 bayes_pls_golite062009
  • GTP binding
  • 0.0171298013679982 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.0028386101905622 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle