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Protein Overview: TRI1

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Krogan NJ, et al. (2006) HIF1 SAP4 SPT2 TRI1

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run HSL7 No Comments McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen RAD51 TRI1 2 Uetz P, et al. (2000)
View Screen PET111 TRI1 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TRI1 and NOP56 Huh WK, et al. (2003)
View Data TRI1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..84] MSA 7.038991 View MSA. No confident structure predictions are available.
2 View Details [85..226] Pfam 51.017729 SWIB/MDM2 domain No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 2.63842828741542 bayes_pls_golite062009
  • transcription regulator activity
  • 2.62775554429027 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.953438255689584 bayes_pls_golite062009
  • histone binding
  • 0.948950535074526 bayes_pls_golite062009
  • protein binding
  • 0.529408559970229 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.439630834571696 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transcription regulator activity
  • 4.01592136607858 bayes_pls_golite062009
  • binding
  • 3.20303599400601 bayes_pls_golite062009
  • basal transcription repressor activity
  • 2.69162769894095 bayes_pls_golite062009
  • transcription coactivator activity
  • 2.58234407051051 bayes_pls_golite062009
  • transcription repressor activity
  • 1.98538788872171 bayes_pls_golite062009
  • transcription activator activity
  • 1.83085389017135 bayes_pls_golite062009
  • transcription factor binding
  • 1.73032563380905 bayes_pls_golite062009
  • transcription cofactor activity
  • 1.60414428986898 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 1.51390743508971 bayes_pls_golite062009
  • protein binding
  • 1.38134467541454 bayes_pls_golite062009
  • ligase activity
  • 0.802664465339603 bayes_pls_golite062009
  • structural molecule activity
  • 0.66106995897056 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.15313128037113 bayes_pls_golite062009
  • catalytic activity
  • 0.121624777548864 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle