| General Information: |
|
| Name(s) found: |
CLP1 /
YOR250C
[SGD]
|
| Description(s) found:
Found 33 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 445 amino acids |
Gene Ontology: |
|
| Cellular Component: |
mRNA cleavage factor complex
[IPI ]
|
| Biological Process: |
mRNA 3'-end processing
[IDA]
mRNA polyadenylation [IDA ]
mRNA cleavage [IDA ]
|
| Molecular Function: |
RNA binding
[IDA]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MASLPGIDEH TTSEELITGD NEWHKLVIPK GSDWQIDLKA EGKLIVKVNS GIVEIFGTEL 60
61 AVDDEYTFQN WKFPIYAVEE TELLWKCPDL TTNTITVKPN HTMKYIYNLH FMLEKIRMSN 120
121 FEGPRVVIVG GSQTGKTSLS RTLCSYALKF NAYQPLYINL DPQQPIFTVP GCISATPISD 180
181 ILDAQLPTWG QSLTSGATLL HNKQPMVKNF GLERINENKD LYLECISQLG QVVGQRLHLD 240
241 PQVRRSGCIV DTPSISQLDE NLAELHHIIE KLNVNIMLVL CSETDPLWEK VKKTFGPELG 300
301 NNNIFFIPKL DGVSAVDDVY KRSLQRTSIR EYFYGSLDTA LSPYAIGVDY EDLTIWKPSN 360
361 VFDNEVGRVE LFPVTITPSN LQHAIIAITF AERRADQATV IKSPILGFAL ITEVNEKRRK 420
421 LRVLLPVPGR LPSKAMILTS YRYLE |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
CLP1 PCF11 RNA14 RNA15 |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
CLP1 HRP1 PCF11 RNA14 RNA15 |
| View Details | Krogan NJ, et al. (2006) |
|
CLP1 RNA14 RNA15 |
| View Details | Gavin AC, et al. (2006) |
|
CLP1 PCF11 RNA14 RNA15 |
| View Details | Gavin AC, et al. (2002) |
|
ACT1 AIM31 CFT1 CFT2 CKA1 CLP1 ENO2 FIP1 GLC7 HHF1, HHF2 HTA1 MPE1 PAP1 PCF11 PFK1 PFS2 PTA1 PTI1 REF2 RNA14 RNA15 RSA3 SEC13 SEC31 SSA3 SSU72 SYC1 TAF6 TIF4632 TYE7 VID24 VMR1 VPS53 YCL046W YSH1 YTH1 |
| View Details | Qiu et al. (2008) |
|
CFT1 CFT2 CLP1 HRP1 MPE1 PAP1 PFS2 PTA1 PTI1 REF2 RNA14 RNA15 YSH1 YTH1 |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 2 | Uetz P, et al. (2000) |
New Feature: Upload Your Own Microscopy Data
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..106] |  |
47.045757 | Signal sequence recognition protein Ffh; GTPase domain of the signal sequence recognition protein Ffh |
| 2 | View Details | [107..362] | |
47.045757 | Signal sequence recognition protein Ffh; GTPase domain of the signal sequence recognition protein Ffh |
| 3 | View Details | [363..445] | |
3.04099 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)