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Protein Overview: gi|2961612

General Information:
Name(s) found: gi|2961612 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|2961612|gb|AAC24517.1| class A calcium channel variant riA-II [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 550 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN][IEA]
    dendrite [UNKNOWN][IEA]
    cytoplasm [UNKNOWN][IEA]
    membrane [IEA]
    voltage-gated calcium channel complex [UNKNOWN][IDA][IEA][TAS]
    integral to membrane [IEA]
    neuronal cell body [UNKNOWN]
    perikaryon [IDA]
    cell projection [UNKNOWN][IEA]
    plasma membrane [UNKNOWN][IDA][IMP]
    Biological Process: nerve-nerve synaptic transmission [UNKNOWN]
    rhythmic synaptic transmission [UNKNOWN][IEA]
    neuromuscular synaptic transmission [UNKNOWN][IEA]
    neurotransmitter metabolic process [UNKNOWN][IEA]
    central nervous system neuron differentiation [UNKNOWN]
    cerebellar molecular layer development [UNKNOWN][IEA]
    glucose metabolic process [UNKNOWN][IEA]
    vestibular nucleus development [UNKNOWN][IEA]
    gamma-aminobutyric acid signaling pathway [UNKNOWN][IEA]
    negative regulation of neuron apoptosis [UNKNOWN][IEA]
    dendrite morphogenesis [UNKNOWN][IEA]
    response to pain [UNKNOWN]
    adult walking behavior [UNKNOWN][IEA]
    cerebellar Purkinje cell layer development [UNKNOWN][IEA]
    ion transport [IEA]
    cell death [UNKNOWN][IEA]
    regulation of axonogenesis [UNKNOWN][IEA]
    calcium ion transport [UNKNOWN][IDA][IEA][IMP]
    behavioral response to pain [UNKNOWN][IEA]
    transmission of nerve impulse [UNKNOWN]
    neurological system process [UNKNOWN]
    cellular chloride ion homeostasis [UNKNOWN][IEA]
    regulation of acetylcholine secretion [UNKNOWN][IEA]
    transmembrane transport [IEA]
    cerebellar Purkinje cell differentiation [UNKNOWN][IEA]
    neuromuscular process [UNKNOWN]
    gamma-aminobutyric acid secretion [UNKNOWN][IEA]
    spinal cord motor neuron differentiation [UNKNOWN][IEA]
    synaptic transmission [UNKNOWN][IMP]
    receptor clustering [UNKNOWN][IEA]
    hormone metabolic process [UNKNOWN][IEA]
    elevation of cytosolic calcium ion concentration [UNKNOWN][IEA][ISS]
    thyroid hormone metabolic process [UNKNOWN]
    musculoskeletal movement, spinal reflex action [UNKNOWN][IEA]
    synapse assembly [UNKNOWN][IEA]
    calcium ion-dependent exocytosis of neurotransmitter [UNKNOWN][IEA]
    regulation of membrane potential [UNKNOWN]
    sulfur amino acid metabolic process [UNKNOWN][IEA]
    cerebellum maturation [UNKNOWN][IEA]
    calcium ion-dependent exocytosis [UNKNOWN]
    negative regulation of hormone biosynthetic process [UNKNOWN][IEA]
    regulation of calcium ion-dependent exocytosis [UNKNOWN][IEA]
    membrane depolarization [UNKNOWN][IEA]
    [NOT]synaptic transmission, GABAergic [UNKNOWN]
    cell growth [UNKNOWN][IEA]
    neuromuscular process controlling balance [UNKNOWN][IEA]
    synaptic transmission, glutamatergic [UNKNOWN][IEA]
    Molecular Function: ion channel activity [IEA]
    calmodulin binding [IDA]
    protein binding [UNKNOWN][IPI]
    high voltage-gated calcium channel activity [UNKNOWN][IEA]
    syntaxin binding [UNKNOWN][IEA]
    voltage-gated ion channel activity [IEA]
    voltage-gated calcium channel activity [UNKNOWN][IDA][IEA][ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VMAFGILNYF RDAWNIFDFV TVLGSITDIL VTEFGNPNNF INLSFLRLFR AARLIKLLRQ  60
   61 GYTIRILLWT FVQSFKVFGN IGIDGEDEDS DEDEFQITEH NNFRTFFQAL MLLFRSATGE 120
  121 AWHNIMLSCL SGKPCDKNSG IQKPECGNEF AYFYFVSFIF LCSFLRLLRM DLPVADDNTV 180
  181 HFNSTLMALI RTALDIKIAK GGADKQQMDA ELRKEMMAIW PNLSQKTLDL LVTPHKSTDL 240
  241 TVGKIYAAMM IMEYYRQSKA KKLQAMREEQ NRTPLMFQRM EPPSPTQEGG PSQNALPSTQ 300
  301 LDPGGGLMAQ ESSMKESPSW VTQRAQEMFQ KTGTWSPERG PPIDMPNSQP NSQSVEMREM 360
  361 GTDGYSDSEH YLPMEGQTRA ASMPRLPAEN QRRRGRPRGN NLSTISDTSP MKRSASVLGP 420
  421 KARRLDDYSL ERVPPEENQR YHQRRRDRGH RTSERSLGRY TDVDTGLGTD LSMTTQSGDL 480
  481 PSKDRDQDRG RPKDRKHRPH HHHHHHHHHP PAPDRERYAQ ERPDTGRARA REQRWSRSPS 540
  541 EGREHATHRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.58

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle