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Protein Overview: FMP40

General Information:
Name(s) found: FMP40 / YPL222W [SGD]
Description(s) found:
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  • gi|6325034|ref|NP_015102.1| Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; Fmp40p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|3183490|sp|Q08968.1|FMP40_YEAST RecName: Full=UPF0061 protein FMP40 [NCBI NR]
  • pir||S65241 hypothetical protein YPL222w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1370460|emb|CAA97937.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • (Q08968) Hypothetical UPF0061 protein YPL222w [Swiss-Prot]
  • UPF0061 protein YPL222W OS=Saccharomyces cerevisiae GN=YPL222W PE=1 SV=1 [Swiss-Prot]
  • UPF0061 protein FMP40 OS=Saccharomyces cerevisiae GN=FMP40 PE=1 SV=1 [Swiss-Prot]
  • FMP40 Found in Mitochondrial Proteome [mips]
  • Putative protein of unknown function; proposed to be involved in responding to environmental stresses; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [SGD]
  • (Q08968) Hypothetical UPF0061 protein YPL222W [4932.FASTACCERV.txt]
  • Chr XVI from 130161-132227 [hmr_yeast5_DM3-1_pombe.fasta]
  • YPL222W, Chr XVI from 130161-132227 [yeast_orfs2]
  • FMP40 SGDID:S0006143, Chr XVI from 130161-132227, Uncharacterized ORF [yeastflysequest.fasta]
  • Fmp40p [Saccharomyces cerevisiae]gi|1370460|emb|CAA97937.1| unnamed protein product [Saccharomyces cerevisiae]gi|3183490|sp|Q08968|YP22_YEAST Hypothetical UPF0061 protein YPL222wgi|2132235|pir||S65241 hypothetical protein YPL222w - yeast (Saccharomyces [nrdb_11152004_Chlamydomonas]
  • YPL222W SGDID:S000006143, Chr XVI from 130161-132227, Uncharacterized ORF, "The authentic, non-tagged protein was localized to the mitochondria." [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YPL222W SGDID:S000006143, Chr XVI from 130161-132227, Uncharacterized ORF, "Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • FMP40 SGDID:S000006143, Chr XVI from 130161-132227, Uncharacterized ORF, "Putative protein of unknown function; proposed to be involved in responding to environmental stresses; the authentic, non-tagged protein is detected in highly purified mitochondria [yeast-200209-contam.fasta]
  • The authentic, non-tagged protein was localized to the mitochondria.; Fmp40p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • UPF0061 protein YPL222W [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • FMP40 SGDID:S000006143, Chr XVI from 130161-132227, Uncharacterized ORF, "Putative protein of unknown function; proposed to be involved in responding to environmental stresses; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies" [yeast-bovrabprots.fasta]
  • [chemostatdb.fasta]
  • UPF0061 protein FMP40 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP40 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • FMP40 SGDID:S000006143, Chr XVI from 130162-132228, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; proposed to be involved in responding to environmental stresses; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies" [yeast-030211-contam.fasta]
  • FMP40 SGDID:S000006143, Chr XVI from 130162-132228, Genome Release 64-2-1, Uncharacterized ORF, "Putative protein of unknown function; proposed to be involved in responding to environmental stresses; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies" [20141208_orf_trans.fasta]
  • YPL222W SGDID:S000006143, Chr XVI from 130162-132228, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; proposed to be involved in responding to environmental stresses; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 688 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed articleLink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEKRTIIKA LKNSAASHFI KKLTADTSLS SIQEAINVVQ QYNATDPVRL KLFHTPRMVS  60
   61 QGAHFAFCLP TKKPHYKPLL LSQNALDEFN LVQDQDLEKI LSGEKVYYSD SIFPYSTVYS 120
  121 GFQFGSFAAQ LGDGRVVNLF DLKDKCSGQW QTFQLKGAGM TPFSRFADGK AVLRSSIREF 180
  181 IMSEALHSIG IPSTRAMQLT LLPGTKAQRR NQEPCAVVCR FAPSWIRLGN FNLFRWRHDL 240
  241 KGLIQLSDYC IEELFAGGTQ FEGKPDFNIF KRDFFPDTET KIDEQVEKDE TEVSTMTGDN 300
  301 ISTLSKYDEF FRHVVSLNAN TVAHWQAYGF ANGVLNTDNT SIMGLTIDYG PFAFLDKFEP 360
  361 SFTPNHDDTA KRYSFANQPS IIWWNLQQFA KDLACLLGPE ARDLELLLKG ELNSVDDALE 420
  421 KTMIERVQKL VELSANEYKY VFTTRYAQIM SQRLGVDLDL EKCMSSTNLK DIEHAAEKAK 480
  481 EFCDVIVEPL LDILQATKVD YNNFFIHLQN YKGPFFIKDK SDTATLFGAF DEEYLGMFFN 540
  541 SKQLQQMAET EEAFAAGEKV FDANGELRLL NEKLQEIRNW TQDYLTLVPP TETAARASLA 600
  601 KKANPLFVPR SWVLEEVVDD LMYSQRDGLQ DPSSELDTSA LKKLYLMSVN PYDRTKWDVT 660
  661 LRPELETKWA DLSHQDDAKF MMQASCSS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) ADA2 AHC1 AHC2 FMP40 GCN5 HFI1 MSS4 NGG1 PDR15 RAD59 REV3 SGF11 SGF29 SGF73 SNL1 SPT20 SPT3 SPT7 SPT8 TAF1 TAF10 TAF11 TAF12 TAF13 TAF3 TAF4 TAF5 TAF6 TAF7 TAF9 UBP8 YMR007W
    View Details Ho Y, et al. (2002) COP1 FMP40 SEC26 SEC27 SEC28

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data FMP40 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..688] Pfam 1000.0 Uncharacterized ACR, YdiU/UPF0061 family No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle