| General Information: |
|
| Name(s) found: |
SET3 /
YKR029C
[SGD]
|
| Description(s) found:
Found 23 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 751 amino acids |
Gene Ontology: |
|
| Cellular Component: |
histone deacetylase complex
[IPI ]
|
| Biological Process: |
histone deacetylation
[IDA][IPI]
negative regulation of meiosis [IMP ]
|
| Molecular Function: |
NAD-dependent histone deacetylase activity
[IPI]
NAD-independent histone deacetylase activity [IPI ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MSVPNSKEQS LLDDASTLLL FSKGKKRAEE ASKIGSKTDT IEHDESHERE KKGAIEMAAA 60
61 ALATASTVSL PLKKATEQSA AEAATSTAAK EETENQPQKQ PQWPVPDSYI VDPDAGIITC 120
121 ICDLNDDDGF TIQCDHCNRW QHAICYGIKD IGMAPDDYLC NSCDPREVDI NLARKIQQER 180
181 INVKTVEPSS SNNSASNKNN GRDRASSTTI SDVGDSFSTD QDNTNHRDKR RKRNPSNNSI 240
241 DSKNESASVN SSDGLTSMPK KKEHFLSAKD AYGAIYLPLK DNVFKSDLIE PFLNKHMDDN 300
301 WVIQYPHKTF KSVSIEVKPY ADIAYSRTYP GFTKLGVYLK KDCIKGDFIQ EILGELDFYK 360
361 NYLTDPRNHY RIWGTAKRRV IFHSHWPIYI DARLSGNSTR YLRRSCQPNV ELVTIKLQDT 420
421 DNRNDKSSGR KSSRIKFVLR ALRDISEDEE LYIKWQWDSK HPILKLIKGM TIDSLDDLER 480
481 YGLINSVETI LSNGECGCGN NSKDCYLLKV KRYAQSLYKS VKSRGKMNNR YKLNEILNQY 540
541 NCKKRREPPI LHRLEEKAQN TIERAPILLN NFYRQKFLNR NNGPKIPQKN TIDSTNNPDD 600
601 IAKPFKFALF AQHSSNISVP KKNETSEKPL IITKSTDYDE SHITNIEELP IPVLLPINKT 660
661 SRQTANDVEE SQSKNEHKLS RTPSLSNFNK ELSKEAQHSQ AKTKEIMTEA SVNSRRESTP 720
721 ESIMHLSDFS SSQLHSKKKL SFADYRKKLL K |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
CPR1 HOS2 HOS4 SET3 SIF2 SNT1 |
| View Details | Krogan NJ, et al. (2006) |
|
AKL1 HOS4 HST1 RFM1 SET3 SIF2 SNT1 SUM1 |
| View Details | Gavin AC, et al. (2006) |
|
CPR1 HOS2 HOS4 SET3 SIF2 SNT1 |
| View Details | Gavin AC, et al. (2002) |
|
BLM10 CDC55 CIN1 CPR1 ERG13 GUS1 HHF1, HHF2 HOS2 HOS4 IML1 KAP95 KEL1 LTE1 MYO5 PFK1 PPH21 PPH22 PRE1 PRE10 PRE2 PRE4 PRE5 PRE6 PRE7 PRE8 PRE9 PUP1 PUP2 PUP3 RRD2 RTS1 RTS3 RVB2 SCL1 SET3 SIF2 SNF2 SNT1 SRP1 TDH2 TDH3 TEF4 TPD3 YBL104C YOR1 YRA1 ZDS1 ZDS2 |
| View Details | Ho Y, et al. (2002) |
|
MSI1 SET3 |
| View Details | Qiu et al. (2008) |
|
HDA1 HDA2 HDA3 HOS1 HOS2 HOS4 HST1 SDS3 SET3 SIF2 SNT1 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 1 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..110] |  |
N/A | No confident structure predictions are available. |
| 2 | View Details | [111..215] | |
6.09691 | Nuclear corepressor KAP-1 (TIF-1beta) |
| 3 | View Details | [216..498] | |
38.169994 | View MSA. No confident structure predictions are available. |
| 4 | View Details | [499..751] | |
N/A | No confident structure predictions are available. |
| 5 | View Details | [580..751] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)