| General Information: |
|
| Name(s) found: |
PAF1 /
YBR279W
[SGD]
|
| Description(s) found:
Found 36 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 445 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nucleus
[IDA ]
transcription elongation factor complex [IPI ]
Cdc73/Paf1 complex [IPI ][TAS]
|
| Biological Process: |
DNA recombination
[IMP]
histone methylation [IMP ]
telomere maintenance [IMP ]
RNA elongation from RNA polymerase II promoter [IPI ]
|
| Molecular Function: |
RNA polymerase II transcription elongation factor activity
[IPI]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MSKKQEYIAP IKYQNSLPVP QLPPKLLVYP ESPETNADSS QLINSLYIKT NVTNLIQQDE 60
61 DLGMPVDLMK FPGLLNKLDS KLLYGFDNVK LDKDDRILLR DPRIDRLTKT DISKVTFLRR 120
121 TEYVSNTIAA HDNTSLKRKR RLDDGDSDDE NLDVNHIISR VEGTFNKTDK WQHPVKKGVK 180
181 MVKKWDLLPD TASMDQVYFI LKFMGSASLD TKEKKSLNTG IFRPVELEED EWISMYATDH 240
241 KDSAILENEL EKGMDEMDDD SHEGKIYKFK RIRDYDMKQV AEKPMTELAI RLNDKDGIAY 300
301 YKPLRSKIEL RRRRVNDIIK PLVKEHDIDQ LNVTLRNPST KEANIRDKLR MKFDPINFAT 360
361 VDEEDDEDEE QPEDVKKESE GDSKTEGSEQ EGENEKDEEI KQEKENEQDE ENKQDENRAA 420
421 DTPETSDAVH TEQKPEEEKE TLQEE |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
CDC73 CHD1 CKA1 CKA2 CKB1 CKB2 CTR9 LEO1 PAF1 POB3 RTF1 SPT16 |
| View Details | Krogan NJ, et al. (2006) |
|
ARA2 AYT1 BRO1 CDC73 CTR9 GLO4 HHT1, HHT2 LEO1 PAF1 PML39 POB3 PSH1 RTF1 SEN1 SPT16 YHR035W |
| View Details | Gavin AC, et al. (2002) |
|
CDC73 CKA1 CKA2 CKB1 CKB2 CTR9 IML1 LEO1 LYS12 PAF1 POB3 RTF1 SPT16 |
| View Details | Qiu et al. (2008) |
|
CDC73 CHD1 CTR9 ELC1 ELP6 LEO1 PAF1 RTF1 SPN1 SPT16 SPT4 SPT5 TFB5 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 1 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..193] |  |
N/A | No confident structure predictions are available. |
| 2 | View Details | [194..445] | |
6.026997 | View MSA. No confident structure predictions are available. |
| 3 | View Details | [311..445] | |
7.039997 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)