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View Structure Prediction Details

Protein: shark-PA
Organism: Drosophila melanogaster
Length: 939 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for shark-PA.

Description E-value Query
Range
Subject
Range
gi|1022831 - gi|1022831|gb|AAA79851.1| tyrosine kinase
482.0 [0..1] [937..1]

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Predicted Domain #1
Region A:
Residues: [1-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRDSDPMKW YHGNLSREAA DELLKQGYED GTFLVRESST AAGDFVLSLL CQGEVCHYQV  60
   61 RRHGGEDAFF SIDDKVQTKI LHGLDTLVDY YQQAANGLPT KLTVPLIRDL PPHNTRSHGV 120
  121 TNLLHRATSK NESKVVFELL KCGYRNFDAK NQDGQTALHL AALHSDEDIL KHLLNAKVQV 180
  181 NSSDSFGCQP LHYAARSKPA SFIRTLISAQ ANVQGRNIDN GYVPLHEAAK HGNLEAVQEL 240
  241 LLAEAPPLPR TSSGEFPFDL AKEAGQTAVE EFLLNYKLPP ANTTRDQWYH GTLTREEAVA 300
  301 ILKKHAKELL AKQPEVDTSG CFLVRYSESP AASGLVLTLL CDQVVKNFRI SQADL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.221849
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
cytoskeletal protein binding 3.56691760558785 bayes_pls_golite062009
protein binding 2.69918165732603 bayes_pls_golite062009
actin binding 2.66339417940702 bayes_pls_golite062009
binding 2.60916417202222 bayes_pls_golite062009
actin filament binding 1.79702615462276 bayes_pls_golite062009
protein kinase activity 1.44085162459605 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.24901082343235 bayes_pls_golite062009
signal transducer activity 1.2375987667709 bayes_pls_golite062009
molecular transducer activity 1.2375987667709 bayes_pls_golite062009
receptor activity 1.22857731988464 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.22209007484238 bayes_pls_golite062009
kinase activity 1.20122575201235 bayes_pls_golite062009
transmembrane receptor activity 1.10325771560525 bayes_pls_golite062009
transcription factor binding 0.84590123339816 bayes_pls_golite062009
transporter activity 0.782432203646924 bayes_pls_golite062009
transmembrane transporter activity 0.653190853243002 bayes_pls_golite062009
transcription regulator activity 0.589753112911856 bayes_pls_golite062009
substrate-specific transporter activity 0.515634991066501 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.375391185084903 bayes_pls_golite062009
structural constituent of cytoskeleton 0.3210142108162 bayes_pls_golite062009
transcription activator activity 0.295016294965448 bayes_pls_golite062009
transferase activity 0.291085370218412 bayes_pls_golite062009
nucleic acid binding 0.280340492381105 bayes_pls_golite062009
ion transmembrane transporter activity 0.238966076323951 bayes_pls_golite062009
DNA binding 0.139886855398905 bayes_pls_golite062009
transcription repressor activity 0.108244697820437 bayes_pls_golite062009
passive transmembrane transporter activity 0.0675641359654993 bayes_pls_golite062009
channel activity 0.0675641359654993 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [356-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YQNGNKVQSG GSKFLYIDDG PYWPSVEHLI AHFMRFSYGL PVSLKYPVPP QPKPEVPSFA  60
   61 TIPRSNMKPK AASPATPPTP VSPHSHHQHP HVPALTITKK KQKENSSS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.17
Match: 1qcfA
Description: Hemapoetic cell kinase Hck; Hemopoetic cell kinase Hck; Haemopoetic cell kinase Hck
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [464-939]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNTLRLTSP KKALFDMNSL RKNKSKGKRS DSESSVSGSL AGTEQELQAA APMLKSLSFS  60
   61 TEFSTFNADG VTGSGAAAAG EVYNVPRNNT PIEIDLPPIA QKTEAEVEYF TKSDVAIERE 120
  121 RAGQWIGNGY QPTMDVLSLL DQQIKAPAVA RLNSLGPNAS TESEMASYLH RKCSGTPSTP 180
  181 SATEVEAAKL RFFIEPEKLV LDREIGHGEF GSVHSGWLLR KSGAGEESRL EVAIKMLSDE 240
  241 HSNKQEFLRE ASVMMRLEHK CIVRLIGIAK GEMLMMVQEL APLGSMLQYI LDHGHEITAN 300
  301 AELKVWASQI ACGMHYLESQ HFVHRDLAAR NILLTARHQA KISDFGMSRS LRPGSTEYQF 360
  361 TQGGRWPIRW YAPESFNLGI FSHASDVWSF GVTIWEMFSL GAPPYGEISN VDAIKLVDSG 420
  421 ERLPQPNLCP AYIYAVMQSC WKERPKDRPT FVYLTEFFAR DPDYQNLPEL VQTVHI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.69897
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
protein kinase activity 5.4586557943719 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 5.04467222534257 bayes_pls_golite062009
kinase activity 4.85903980916957 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.63692708178478 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 3.41480681854114 bayes_pls_golite062009
transmembrane receptor protein kinase activity 3.40140621607334 bayes_pls_golite062009
JUN kinase kinase kinase kinase activity 3.31264000585107 bayes_pls_golite062009
transferase activity 3.26787750561728 bayes_pls_golite062009
epidermal growth factor receptor binding 2.9751846707539 bayes_pls_golite062009
protein tyrosine kinase activity 2.8153155526437 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
transmembrane receptor activity 2.59526003830791 bayes_pls_golite062009
actin binding 2.42703012169921 bayes_pls_golite062009
signal transducer activity 2.40586892801446 bayes_pls_golite062009
molecular transducer activity 2.40586892801446 bayes_pls_golite062009
receptor activity 2.39311927684508 bayes_pls_golite062009
cytoskeletal protein binding 2.38494443043195 bayes_pls_golite062009
protein binding 2.276111749106 bayes_pls_golite062009
receptor signaling protein activity 2.10379226653669 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.81249386965144 bayes_pls_golite062009
molecular adaptor activity 1.81145713371725 bayes_pls_golite062009
actin filament binding 1.68048469859634 bayes_pls_golite062009
non-membrane spanning protein tyrosine kinase activity 1.66669268613198 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
vinculin binding 1.63216315345235 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
SH3/SH2 adaptor activity 1.59474164216385 bayes_pls_golite062009
growth factor binding 1.53863828216563 bayes_pls_golite062009
integrin binding 1.44154155381408 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 1.10045286406485 bayes_pls_golite062009
transforming growth factor beta receptor activity 1.10045286406485 bayes_pls_golite062009
insulin receptor substrate binding 0.95914323793919 bayes_pls_golite062009
phosphoinositide 3-kinase binding 0.91037901281763 bayes_pls_golite062009
protein binding, bridging 0.83823250804321 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
fibroblast growth factor receptor activity 0.75189004129952 bayes_pls_golite062009
transporter activity 0.710766490066447 bayes_pls_golite062009
MAP kinase kinase activity 0.610230065465794 bayes_pls_golite062009
transmembrane transporter activity 0.60324822483033 bayes_pls_golite062009
activin binding 0.510364757301021 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.499492353295369 bayes_pls_golite062009
protein kinase C activity 0.41587987561486 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
substrate-specific transporter activity 0.385603245903806 bayes_pls_golite062009
kinase binding 0.26752427107238 bayes_pls_golite062009
protein complex binding 0.239339759110451 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.152203945257581 bayes_pls_golite062009
transforming growth factor beta receptor activity, type I 0.0506751594607393 bayes_pls_golite062009
MAP kinase kinase kinase kinase activity 0.01826424351081 bayes_pls_golite062009
protein kinase binding 0.00674998152095019 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle