| Protein: | TFP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1071 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TFP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1071] | [1..1071] |
|
|
0.0 | [16..1060] | [2..1046] |
|
|
0.0 | [14..1060] | [2..1095] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MAGAIENARK EIKRISLEDH AESEYGAIYS VSGPVVIAEN MIGCAMYELV KVGHDNLVGE 60
61 VIRIDGDKAT IQVYEETAGL TVGD
|
| Detection Method: |  |
| Confidence: | 21.886057 |
| Match: | PF02874.7 |
| Description: | No description for PF02874.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| hydrogen ion transmembrane transporter activity | 8.99485812867371 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 8.43809246013427 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 7.28612792538764 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 6.56211055461575 | bayes_pls_golite062009 |
| proton-transporting ATPase activity, rotational mechanism | 3.88373794136406 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.39040720727162 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.28894636799771 | bayes_pls_golite062009 |
| hydrogen-exporting ATPase activity, phosphorylative mechanism | 3.20056737251701 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 3.03916263027565 | bayes_pls_golite062009 |
| transporter activity | 2.9325438450934 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.77909183361556 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.67498718917813 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.60251056808401 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.58430117129985 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.58115131779782 | bayes_pls_golite062009 |
| hydrolase activity | 2.48023456865742 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 2.38650577592563 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 2.38284234201968 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.34368052096144 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 2.33928814826072 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 2.33884554716207 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 2.28786776436738 | bayes_pls_golite062009 |
| cation-transporting ATPase activity | 2.2242188318911 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.19267030982632 | bayes_pls_golite062009 |
| binding | 2.15223415484989 | bayes_pls_golite062009 |
| ATPase activity | 2.14491816112038 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.8085602148752 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 1.53938373974092 | bayes_pls_golite062009 |
| nucleic acid binding | 1.50098700711558 | bayes_pls_golite062009 |
| DNA binding | 1.19194387475416 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of ions | 1.12292194267086 | bayes_pls_golite062009 |
| transcription regulator activity | 1.12203014375349 | bayes_pls_golite062009 |
| catalytic activity | 0.942640875796745 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.875943780299382 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.869710683000949 | bayes_pls_golite062009 |
| helicase activity | 0.802129193518991 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.714145134870091 | bayes_pls_golite062009 |
| nucleotide binding | 0.708394757192331 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.70300395089804 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.702990562850678 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 0.630907399726593 | bayes_pls_golite062009 |
| DNA helicase activity | 0.606831357648651 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.520434833402482 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.520010821042307 | bayes_pls_golite062009 |
| potassium channel activity | 0.516313726033988 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.329657633591245 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.329657633591245 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 0.29111329295693 | bayes_pls_golite062009 |
| cation channel activity | 0.267140200199812 | bayes_pls_golite062009 |
| ATP binding | 0.221274151647827 | bayes_pls_golite062009 |
| protein binding | 0.201869978778282 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.198698067988182 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.194178388079667 | bayes_pls_golite062009 |
| structural molecule activity | 0.191568396055768 | bayes_pls_golite062009 |
| ion channel activity | 0.17671388431308 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 0.168531365787205 | bayes_pls_golite062009 |
| translation regulator activity | 0.165004576559811 | bayes_pls_golite062009 |
| channel activity | 0.164130750223518 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.164130750223518 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.154272377180496 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.144513585153713 | bayes_pls_golite062009 |
| transcription factor activity | 0.101575043176033 | bayes_pls_golite062009 |
| four-way junction helicase activity | 0.100226648459719 | bayes_pls_golite062009 |
|
Region A: Residues: [85-189] |
1 11 21 31 41 51
| | | | | |
1 PVLRTGKPLS VELGPGLMET IYDGIQRPLK AIKEESQSIY IPRGIDTPAL DRTIKWQFTP 60
61 GKFQVGDHIS GGDIYGSVFE NSLISSHKIL LPPRSRGTIT WIAPA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [190-261] |
1 11 21 31 41 51
| | | | | |
1 GEYTLDEKIL EVEFDGKKSD FTLYHTWPVR VPRPVTEKLS ADYPLLTGQR VLDALFPCVQ 60
61 GGTTCIPGAF GC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [262-512] |
1 11 21 31 41 51
| | | | | |
1 GKTVISQSLS KYSNSDAIIY VGCFAKGTNV LMADGSIECI ENIEVGNKVM GKDGRPREVI 60
61 KLPRGRETMY SVVQKSQHRA HKSDSSREVP ELLKFTCNAT HELVVRTPRS VRRLSRTIKG 120
121 VEYFEVITFE MGQKKAPDGR IVELVKEVSK SYPISEGPER ANELVESYRK ASNKAYFEWT 180
181 IEARDLSLLG SHVRKATYQT YAPILYENDH FFDYMQKSKF HLTIEGPKVL AYLLGLWIGD 240
241 GLSDRATFSV D
|
| Detection Method: | |
| Confidence: | 80.0 |
| Match: | 1jvaA_ |
| Description: | VMA1-derived endonuclease (VDE) PI-Scei intein; VMA1-derived endonuclease (VDE) PI-SceI |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [513-1071] |
1 11 21 31 41 51
| | | | | |
1 SRDTSLMERV TEYAEKLNLC AEYKDRKEPQ VAKTVNLYSK VVRGNGIRNN LNTENPLWDA 60
61 IVGLGFLKDG VKNIPSFLST DNIGTRETFL AGLIDSDGYV TDEHGIKATI KTIHTSVRDG 120
121 LVSLARSLGL VVSVNAEPAK VDMNGTKHKI SYAIYMSGGD VLLNVLSKCA GSKKFRPAPA 180
181 AAFARECRGF YFELQELKED DYYGITLSDD SDHQFLLANQ VVVHNCGERG NEMAEVLMEF 240
241 PELYTEMSGT KEPIMKRTTL VANTSNMPVA AREASIYTGI TLAEYFRDQG KNVSMIADSS 300
301 SRWAEALREI SGRLGEMPAD QGFPAYLGAK LASFYERAGK AVALGSPDRT GSVSIVAAVS 360
361 PAGGDFSDPV TTATLGITQV FWGLDKKLAQ RKHFPSINTS VSYSKYTNVL NKFYDSNYPE 420
421 FPVLRDRMKE ILSNAEELEQ VVQLVGKSAL SDSDKITLDV ATLIKEDFLQ QNGYSTYDAF 480
481 CPIWKTFDMM RAFISYHDEA QKAVANGANW SKLADSTGDV KHAVSSSKFF EPSRGEKEVH 540
541 GEFEKLLSTM QERFAESTD
|
| Detection Method: | |
| Confidence: | 113.0 |
| Match: | 1bmfA_ |
| Description: | F1 ATP synthase alpha subunit, domain 3; F1 ATP synthase alpha subunit, domain 1; Central domain of alpha subunit of F1 ATP synthase |
Matching Structure (courtesy of the PDB): |
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