| Protein: | CDC7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 507 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..507] | [1..507] |
|
|
0.0 | [30..299] | [1..273] |
|
|
0.0 | [30..299] | [1..273] |
|
|
0.0 | [30..298] | [1..272] |
|
|
0.0 | [30..298] | [1..272] |
|
|
0.0 | [30..299] | [1..273] |
|
|
0.0 | [30..299] | [1..273] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MTSKTKNIDD IPPEIKEEMI QLYHDLPGIE NEYKLIDKIG EGTFSSVYKA KDITGKITKK 60
61 FASHFWNYGS NYVALKKIYV TSSPQRIYNE LNLLYIMTGS SRVAPLCDAK RVRDQVIAVL 120
121 PY
|
| Detection Method: |  |
| Confidence: | 243.0 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphotransferase activity, alcohol group as acceptor | 5.49988294224815 | bayes_pls_golite062009 |
| protein kinase activity | 5.4586557943719 | bayes_pls_golite062009 |
| kinase activity | 5.3287080791198 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.96052051118534 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 4.46381887831481 | bayes_pls_golite062009 |
| transferase activity | 3.97138602499442 | bayes_pls_golite062009 |
| acetylcholine receptor activator activity | 3.57683141337465 | bayes_pls_golite062009 |
| binding | 2.74863538127007 | bayes_pls_golite062009 |
| tau-protein kinase activity | 2.37138140221719 | bayes_pls_golite062009 |
| protein binding | 2.276111749106 | bayes_pls_golite062009 |
| ATP binding | 1.97600611746091 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.94085498993561 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.93596671856664 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.90928021591891 | bayes_pls_golite062009 |
| molecular transducer activity | 1.79921740914853 | bayes_pls_golite062009 |
| signal transducer activity | 1.79921740914853 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.74206248731815 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.70788499622067 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.68012041942855 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.65732943334212 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.65726906484847 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.63763394711025 | bayes_pls_golite062009 |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
| transcription regulator activity | 1.56748951434625 | bayes_pls_golite062009 |
| nucleic acid binding | 1.46547714006072 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 1.3898059094397 | bayes_pls_golite062009 |
| receptor signaling protein serine/threonine kinase activity | 1.38496328649031 | bayes_pls_golite062009 |
| DNA binding | 1.35333135345112 | bayes_pls_golite062009 |
| receptor signaling protein activity | 1.27291233344322 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 1.2266791546014 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| transcription repressor activity | 1.14496167267281 | bayes_pls_golite062009 |
| transcription factor activity | 1.10928254946881 | bayes_pls_golite062009 |
| insulin receptor substrate binding | 0.98689034826741 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.938271345744087 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.913893847407112 | bayes_pls_golite062009 |
| MAP kinase activity | 0.81943579965027 | bayes_pls_golite062009 |
| receptor activity | 0.775180603313375 | bayes_pls_golite062009 |
| transporter activity | 0.595111702412257 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 0.499492353295369 | bayes_pls_golite062009 |
| protein serine/threonine/tyrosine kinase activity | 0.48345772948903 | bayes_pls_golite062009 |
| enzyme binding | 0.46284745266176 | bayes_pls_golite062009 |
| kinase binding | 0.443916188551908 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.41384976209545 | bayes_pls_golite062009 |
| magnesium ion binding | 0.393328812780268 | bayes_pls_golite062009 |
| MAP kinase kinase kinase activity | 0.37115026509016 | bayes_pls_golite062009 |
| MAP kinase kinase activity | 0.35402045013148 | bayes_pls_golite062009 |
| axon guidance receptor activity | 0.330635248803668 | bayes_pls_golite062009 |
| protein kinase binding | 0.285611963740145 | bayes_pls_golite062009 |
| transforming growth factor beta receptor activity | 0.19622756073807 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase activity | 0.19622756073807 | bayes_pls_golite062009 |
| growth factor binding | 0.153144089598532 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0922946791401962 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0040394359628233 | bayes_pls_golite062009 |
|
Region A: Residues: [123-200] |
1 11 21 31 41 51
| | | | | |
1 YPHEEFRTFY RDLPIKGIKK YIWELLRALK FVHSKGIIHR DIKPTNFLFN LELGRGVLVD 60
61 FGLAEAQMDY KSMISSQN
|
| Detection Method: | |
| Confidence: | 243.0 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [201-252] |
1 11 21 31 41 51
| | | | | |
1 DYDNYANTNH DGGYSMRNHE QFCPCIMRNQ YSPNSHNQTP PMVTIQNGKV VH
|
| Detection Method: | |
| Confidence: | 243.0 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [253-304] |
1 11 21 31 41 51
| | | | | |
1 LNNVNGVDLT KGYPKNETRR IKRANRAGTR GFRAPEVLMK CGAQSTKIDI WS
|
| Detection Method: | |
| Confidence: | 243.0 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [305-422] |
1 11 21 31 41 51
| | | | | |
1 VGVILLSLLG RRFPMFQSLD DADSLLELCT IFGWKELRKC AALHGLGFEA SGLIWDKPNG 60
61 YSNGLKEFVY DLLNKECTIG TFPEYSVAFE TFGFLQQELH DRMSIEPQLP DPKTNMDA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [423-507] |
1 11 21 31 41 51
| | | | | |
1 VDAYELKKYQ EEIWSDHYWC FQVLEQCFEM DPQKRSSAED LLKTPFFNEL NENTYLLDGE 60
61 STDEDDVVSS SEADLLDKDV LLISE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
