| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Kap104. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 12 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleus | 3.0954E-3 | 12 | 2041 | 9 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nuclear transport | 7.5748E-5 | 12 | 130 | 4 | 6292 |
| nucleocytoplasmic transport | 7.5748E-5 | 12 | 130 | 4 | 6292 |
| RNA processing | 4.351E-4 | 12 | 380 | 5 | 6292 |
| mRNA polyadenylation | 5.6006E-4 | 12 | 19 | 2 | 6292 |
| RNA polyadenylation | 1.0566E-3 | 12 | 26 | 2 | 6292 |
| mRNA 3'-end processing | 1.5037E-3 | 12 | 31 | 2 | 6292 |
| rRNA processing | 1.5818E-3 | 12 | 128 | 3 | 6292 |
| rRNA metabolic process | 1.9237E-3 | 12 | 137 | 3 | 6292 |
| RNA 3'-end processing | 2.752E-3 | 12 | 42 | 2 | 6292 |
| ribosome biogenesis | 3.1264E-3 | 12 | 346 | 4 | 6292 |
| protein localization in nucleus | 3.5826E-3 | 12 | 48 | 2 | 6292 |
| protein import into nucleus | 3.5826E-3 | 12 | 48 | 2 | 6292 |
| nuclear import | 3.5826E-3 | 12 | 48 | 2 | 6292 |
| glucose 6-phosphate metabolic process | 3.811E-3 | 12 | 2 | 1 | 6292 |
| glucose 1-phosphate metabolic process | 3.811E-3 | 12 | 2 | 1 | 6292 |
| ribonucleoprotein complex biogenesis | 4.1497E-3 | 12 | 374 | 4 | 6292 |
| nucleus organization | 4.8498E-3 | 12 | 56 | 2 | 6292 |
| UDP-glucose metabolic process | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| mRNA metabolic process | 6.7108E-3 | 12 | 213 | 3 | 6292 |
| ncRNA processing | 6.8876E-3 | 12 | 215 | 3 | 6292 |
| galactose catabolic process | 9.5026E-3 | 12 | 5 | 1 | 6292 |
| RNA export from nucleus | 9.7018E-3 | 12 | 80 | 2 | 6292 |
| RNA transport | 9.9369E-3 | 12 | 81 | 2 | 6292 |
| nucleic acid transport | 9.9369E-3 | 12 | 81 | 2 | 6292 |
| establishment of RNA localization | 9.9369E-3 | 12 | 81 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| phosphoglucomutase activity | 3.811E-3 | 12 | 2 | 1 | 6292 |
| aspartate-tRNA ligase activity | 3.811E-3 | 12 | 2 | 1 | 6292 |
| RNA binding | 3.8749E-3 | 12 | 367 | 4 | 6292 |
| nuclear localization sequence binding | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| GTPase activity | 5.7327E-3 | 12 | 61 | 2 | 6292 |
| Ran GTPase binding | 7.6087E-3 | 12 | 4 | 1 | 6292 |
| poly(A) RNA binding | 9.5026E-3 | 12 | 5 | 1 | 6292 |
| single-stranded RNA binding | 9.5026E-3 | 12 | 5 | 1 | 6292 |
| poly-purine tract binding | 9.5026E-3 | 12 | 5 | 1 | 6292 |