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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Elp2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transcription elongation factor complex 4.2475E-7 5 23 3 6292
nucleoplasm part 5.5029E-4 5 245 3 6292
nucleoplasm 6.8591E-4 5 264 3 6292
nuclear lumen 3.3223E-3 5 453 3 6292
nucleus 3.5796E-3 5 2041 5 6292
organelle lumen 9.7686E-3 5 660 3 6292
intracellular organelle lumen 9.7686E-3 5 660 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

tRNA modification 4.9613E-6 5 51 3 6292
RNA modification 1.2982E-5 5 70 3 6292
tRNA processing 2.1722E-5 5 83 3 6292
regulation of cellular process 3.2051E-5 5 796 5 6292
regulation of biological process 3.8116E-5 5 824 5 6292
regulation of transcription 6.5047E-5 5 384 4 6292
tRNA metabolic process 6.5804E-5 5 120 3 6292
regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 8.8471E-5 5 415 4 6292
regulation of nitrogen compound metabolic process 8.9318E-5 5 416 4 6292
regulation of gene expression 1.1661E-4 5 445 4 6292
regulation of macromolecule biosynthetic process 1.2842E-4 5 456 4 6292
regulation of cellular biosynthetic process 1.4716E-4 5 472 4 6292
regulation of biosynthetic process 1.484E-4 5 473 4 6292
regulation of macromolecule metabolic process 1.6786E-4 5 488 4 6292
regulation of primary metabolic process 2.06E-4 5 514 4 6292
regulation of cellular metabolic process 2.4298E-4 5 536 4 6292
regulation of metabolic process 2.6322E-4 5 547 4 6292
biological regulation 2.6452E-4 5 1213 5 6292
transcription 2.7282E-4 5 552 4 6292
ncRNA processing 3.7398E-4 5 215 3 6292
regulation of transcription from RNA polymerase II promoter 4.4494E-4 5 228 3 6292
ncRNA metabolic process 6.3367E-4 5 257 3 6292
transcription from RNA polymerase II promoter 1.3805E-3 5 335 3 6292
regulation of transcription, DNA-dependent 1.6762E-3 5 358 3 6292
regulation of RNA metabolic process 1.7454E-3 5 363 3 6292
RNA processing 1.9946E-3 5 380 3 6292
transcription, DNA-dependent 4.4943E-3 5 503 3 6292
RNA biosynthetic process 4.6241E-3 5 508 3 6292
protein urmylation 4.7604E-3 5 6 1 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
macromolecule modification 6.4022E-3 5 569 3 6292
gene expression 7.2106E-3 5 1283 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


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