| From Publication: | Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22. |
| Notes: | From the published set of protein complexes (core proteins only) |
| Complex Size: | 7 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| transcription factor TFIID complex | 8.335E-20 | 7 | 15 | 7 | 6292 |
| DNA-directed RNA polymerase II, holoenzyme | 3.004E-15 | 7 | 56 | 7 | 6292 |
| transcription factor complex | 1.7226E-14 | 7 | 71 | 7 | 6292 |
| nucleoplasm part | 1.2489E-10 | 7 | 245 | 7 | 6292 |
| nucleoplasm | 2.1199E-10 | 7 | 264 | 7 | 6292 |
| nuclear lumen | 9.6025E-9 | 7 | 453 | 7 | 6292 |
| organelle lumen | 1.3579E-7 | 7 | 660 | 7 | 6292 |
| intracellular organelle lumen | 1.3579E-7 | 7 | 660 | 7 | 6292 |
| membrane-enclosed lumen | 2.0537E-7 | 7 | 700 | 7 | 6292 |
| nuclear part | 5.0081E-6 | 7 | 1103 | 7 | 6292 |
| protein complex | 6.1975E-6 | 7 | 1137 | 7 | 6292 |
| macromolecular complex | 7.9244E-5 | 7 | 1635 | 7 | 6292 |
| SLIK (SAGA-like) complex | 1.2639E-4 | 7 | 16 | 2 | 6292 |
| SAGA complex | 2.4252E-4 | 7 | 22 | 2 | 6292 |
| SAGA-type complex | 2.6548E-4 | 7 | 23 | 2 | 6292 |
| nucleus | 3.7528E-4 | 7 | 2041 | 7 | 6292 |
| organelle part | 8.2061E-4 | 7 | 2282 | 7 | 6292 |
| intracellular organelle part | 8.2061E-4 | 7 | 2282 | 7 | 6292 |
| histone acetyltransferase complex | 9.8164E-4 | 7 | 44 | 2 | 6292 |
| transcription factor TFIIIB complex | 3.3344E-3 | 7 | 3 | 1 | 6292 |
| RNA polymerase I transcription factor complex | 9.9746E-3 | 7 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA polymerase II transcription factor activity | 1.3683E-12 | 7 | 130 | 7 | 6292 |
| general RNA polymerase II transcription factor activity | 6.0562E-12 | 7 | 64 | 6 | 6292 |
| transcription regulator activity | 1.2424E-9 | 7 | 339 | 7 | 6292 |
| protein homodimerization activity | 2.224E-3 | 7 | 2 | 1 | 6292 |
| identical protein binding | 3.3344E-3 | 7 | 3 | 1 | 6292 |
| protein dimerization activity | 6.6592E-3 | 7 | 6 | 1 | 6292 |