YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear envelope lumen 4.4437E-3 7 4 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transcription, DNA-dependent 1.162E-3 7 503 4 6292
RNA biosynthetic process 1.2065E-3 7 508 4 6292
transcription 1.6538E-3 7 552 4 6292
transmembrane transport 3.4587E-3 7 83 2 6292
biological regulation 3.9225E-3 7 1213 5 6292
transcription from RNA polymerase II promoter 4.4591E-3 7 335 3 6292
regulation of transcription, DNA-dependent 5.3838E-3 7 358 3 6292
regulation of RNA metabolic process 5.5994E-3 7 363 3 6292
regulation of transcription 6.563E-3 7 384 3 6292
negative regulation of transcription by carbon catabolites 7.7654E-3 7 7 1 6292
negative regulation of transcription by glucose 7.7654E-3 7 7 1 6292
negative regulation of transcription from RNA polymerase II promoter by carbon catabolites 7.7654E-3 7 7 1 6292
negative regulation of transcription from RNA polymerase II promoter by glucose 7.7654E-3 7 7 1 6292
regulation of transcription from RNA polymerase II promoter by carbon catabolites 7.7654E-3 7 7 1 6292
regulation of transcription from RNA polymerase II promoter by glucose 7.7654E-3 7 7 1 6292
nucleic acid metabolic process 7.9545E-3 7 1415 5 6292
regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 8.1627E-3 7 415 3 6292
regulation of nitrogen compound metabolic process 8.218E-3 7 416 3 6292
regulation of transcription by glucose 8.8705E-3 7 8 1 6292
drug transmembrane transport 8.8705E-3 7 8 1 6292
regulation of gene expression 9.92E-3 7 445 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transcription regulator activity 2.5455E-4 7 339 4 6292
specific RNA polymerase II transcription factor activity 1.2671E-3 7 50 2 6292
RNA polymerase II transcription factor activity 8.3115E-3 7 130 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle