From Publication: | Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44 |
Notes: | MIPS hand-curated complex set. MIPS complex ID: 445.30 |
Complex Size: | 4 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
SCF ubiquitin ligase complex | 5.0581E-12 | 4 | 11 | 4 | 6292 |
cullin-RING ubiquitin ligase complex | 1.5343E-11 | 4 | 14 | 4 | 6292 |
ubiquitin ligase complex | 1.8916E-9 | 4 | 43 | 4 | 6292 |
protein complex | 1.0617E-3 | 4 | 1137 | 4 | 6292 |
nuclear SCF ubiquitin ligase complex | 1.2712E-3 | 4 | 2 | 1 | 6292 |
RAVE complex | 1.9063E-3 | 4 | 3 | 1 | 6292 |
CBF3 complex | 2.5411E-3 | 4 | 4 | 1 | 6292 |
macromolecular complex | 4.5471E-3 | 4 | 1635 | 4 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
ubiquitin-protein ligase activity | 2.8023E-6 | 4 | 57 | 3 | 6292 |
small conjugating protein ligase activity | 3.62E-6 | 4 | 62 | 3 | 6292 |
acid-amino acid ligase activity | 5.4647E-6 | 4 | 71 | 3 | 6292 |
ligase activity, forming carbon-nitrogen bonds | 1.2781E-5 | 4 | 94 | 3 | 6292 |
DNA replication origin binding | 2.3591E-5 | 4 | 13 | 2 | 6292 |
ligase activity | 5.2211E-5 | 4 | 150 | 3 | 6292 |
sequence-specific DNA binding | 3.676E-4 | 4 | 50 | 2 | 6292 |
protein binding | 3.3984E-3 | 4 | 612 | 3 | 6292 |
DNA binding | 9.3704E-3 | 4 | 256 | 2 | 6292 |