| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 22 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| small nucleolar ribonucleoprotein complex | 8.0545E-33 | 22 | 72 | 18 | 6292 |
| nuclear outer membrane | 7.7265E-22 | 22 | 86 | 14 | 6292 |
| nuclear membrane | 4.6986E-21 | 22 | 97 | 14 | 6292 |
| outer membrane | 3.3138E-17 | 22 | 178 | 14 | 6292 |
| organelle outer membrane | 3.3138E-17 | 22 | 178 | 14 | 6292 |
| ribonucleoprotein complex | 1.0664E-16 | 22 | 514 | 18 | 6292 |
| nuclear envelope | 1.6288E-16 | 22 | 199 | 14 | 6292 |
| nucleolus | 3.7439E-16 | 22 | 211 | 14 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 1.4345E-15 | 22 | 232 | 14 | 6292 |
| endomembrane system | 2.6416E-12 | 22 | 398 | 14 | 6292 |
| nuclear lumen | 1.5523E-11 | 22 | 453 | 14 | 6292 |
| envelope | 6.7928E-11 | 22 | 505 | 14 | 6292 |
| organelle envelope | 6.7928E-11 | 22 | 505 | 14 | 6292 |
| nuclear part | 7.794E-11 | 22 | 1103 | 18 | 6292 |
| organelle lumen | 2.4606E-9 | 22 | 660 | 14 | 6292 |
| intracellular organelle lumen | 2.4606E-9 | 22 | 660 | 14 | 6292 |
| membrane part | 2.5614E-9 | 22 | 662 | 14 | 6292 |
| organelle membrane | 4.6073E-9 | 22 | 692 | 14 | 6292 |
| membrane-enclosed lumen | 5.363E-9 | 22 | 700 | 14 | 6292 |
| macromolecular complex | 6.5084E-8 | 22 | 1635 | 18 | 6292 |
| non-membrane-bounded organelle | 3.2163E-7 | 22 | 959 | 14 | 6292 |
| intracellular non-membrane-bounded organelle | 3.2163E-7 | 22 | 959 | 14 | 6292 |
| nucleus | 2.5653E-6 | 22 | 2041 | 18 | 6292 |
| preribosome | 4.8539E-6 | 22 | 34 | 4 | 6292 |
| membrane | 5.2833E-6 | 22 | 1198 | 14 | 6292 |
| intracellular organelle part | 1.5565E-5 | 22 | 2282 | 18 | 6292 |
| organelle part | 1.5565E-5 | 22 | 2282 | 18 | 6292 |
| small-subunit processome | 1.736E-4 | 22 | 6 | 2 | 6292 |
| nucleolar part | 4.7878E-4 | 22 | 45 | 3 | 6292 |
| 90S preribosome | 1.5377E-3 | 22 | 17 | 2 | 6292 |
| intracellular part | 4.7906E-3 | 22 | 4938 | 22 | 6292 |
| intracellular | 5.6476E-3 | 22 | 4975 | 22 | 6292 |
| box C/D snoRNP complex | 6.9813E-3 | 22 | 2 | 1 | 6292 |
| Noc4p-Nop14p complex | 6.9813E-3 | 22 | 2 | 1 | 6292 |
| membrane-bounded organelle | 7.357E-3 | 22 | 3771 | 19 | 6292 |
| intracellular membrane-bounded organelle | 7.357E-3 | 22 | 3771 | 19 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ribosome biogenesis | 1.0142E-28 | 22 | 346 | 22 | 6292 |
| ribonucleoprotein complex biogenesis | 5.9191E-28 | 22 | 374 | 22 | 6292 |
| rRNA processing | 1.4251E-25 | 22 | 128 | 17 | 6292 |
| rRNA metabolic process | 4.8486E-25 | 22 | 137 | 17 | 6292 |
| maturation of SSU-rRNA | 2.3386E-24 | 22 | 59 | 14 | 6292 |
| cellular component biogenesis | 6.4039E-22 | 22 | 694 | 22 | 6292 |
| ncRNA processing | 1.4264E-21 | 22 | 215 | 17 | 6292 |
| ncRNA metabolic process | 3.1957E-20 | 22 | 257 | 17 | 6292 |
| RNA processing | 2.6736E-17 | 22 | 380 | 17 | 6292 |
| RNA metabolic process | 1.2904E-10 | 22 | 954 | 17 | 6292 |
| rRNA modification | 2.6704E-9 | 22 | 18 | 5 | 6292 |
| gene expression | 1.5335E-8 | 22 | 1283 | 17 | 6292 |
| nucleic acid metabolic process | 7.2322E-8 | 22 | 1415 | 17 | 6292 |
| nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 3.5382E-7 | 22 | 1566 | 17 | 6292 |
| cellular nitrogen compound metabolic process | 2.3388E-6 | 22 | 1770 | 17 | 6292 |
| nitrogen compound metabolic process | 2.8001E-6 | 22 | 1791 | 17 | 6292 |
| RNA modification | 3.3536E-6 | 22 | 70 | 5 | 6292 |
| cellular macromolecule metabolic process | 1.0529E-4 | 22 | 2285 | 17 | 6292 |
| macromolecule metabolic process | 1.5681E-4 | 22 | 2349 | 17 | 6292 |
| cellular process | 4.2871E-4 | 22 | 4426 | 22 | 6292 |
| primary metabolic process | 2.8529E-3 | 22 | 2896 | 17 | 6292 |
| ribosomal small subunit biogenesis | 3.6053E-3 | 22 | 26 | 2 | 6292 |
| cellular metabolic process | 5.2302E-3 | 22 | 3033 | 17 | 6292 |
| metabolic process | 8.7346E-3 | 22 | 3157 | 17 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| snoRNA binding | 1.1157E-23 | 22 | 31 | 12 | 6292 |
| RNA binding | 4.9463E-10 | 22 | 367 | 12 | 6292 |
| nucleic acid binding | 4.2686E-7 | 22 | 666 | 12 | 6292 |
| binding | 8.5102E-5 | 22 | 1294 | 13 | 6292 |