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Protein Overview: YCK3

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run VAM3 Sample: HX11 - both fusion and trans-SNARE complex formation take place. Hao Xu, et al. (2010)
View Run VAM3 Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). Hao Xu, et al. (2010)
View Run VAM3 Sample: HX13 - trans-SNARE complex forms but fusion is blocked. Hao Xu, et al. (2010)
View Run VAM3 Sample: HX14 - mixture in detergent (control). Hao Xu, et al. (2010)
View Run VAM3 hx21: both fusion and trans-SNARE complex formation take place. Investigating Vam3p, Nyv1p and their partners in trans-SNARE complex Hao Xu, et al. (2010)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data YCK3 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..73]
[90..105]
PSI-BLAST 1185.045757 Casein kinase-1, CK1
2 View Details [74..89]
[106..111]
[136..204]
PSI-BLAST 1185.045757 Casein kinase-1, CK1
3 View Details [112..135]
[205..392]
PSI-BLAST 1185.045757 Casein kinase-1, CK1
4 View Details [393..524] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • phosphotransferase activity, alcohol group as acceptor
  • 5.49988294224815 bayes_pls_golite062009
  • protein kinase activity
  • 5.4586557943719 bayes_pls_golite062009
  • kinase activity
  • 5.3287080791198 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 4.96052051118534 bayes_pls_golite062009
  • protein serine/threonine kinase activity
  • 4.46381887831481 bayes_pls_golite062009
  • transferase activity
  • 3.97138602499442 bayes_pls_golite062009
  • protein tyrosine kinase activity
  • 2.8153155526437 bayes_pls_golite062009
  • binding
  • 2.74863538127007 bayes_pls_golite062009
  • transmembrane receptor activity
  • 2.59526003830791 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
  • 2.54265774272269 bayes_pls_golite062009
  • signal transducer activity
  • 2.40586892801446 bayes_pls_golite062009
  • molecular transducer activity
  • 2.40586892801446 bayes_pls_golite062009
  • receptor activity
  • 2.39311927684508 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
  • 2.16831387024372 bayes_pls_golite062009
  • receptor signaling protein activity
  • 2.10379226653669 bayes_pls_golite062009
  • ATP binding
  • 1.97600611746091 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 1.93596671856664 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 1.90928021591891 bayes_pls_golite062009
  • receptor signaling protein serine/threonine kinase activity
  • 1.81249386965144 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 1.65732943334212 bayes_pls_golite062009
  • ribonucleotide binding
  • 1.65726906484847 bayes_pls_golite062009
  • purine nucleotide binding
  • 1.63763394711025 bayes_pls_golite062009
  • nucleotide binding
  • 1.63195828048121 bayes_pls_golite062009
  • phosphoinositide 3-kinase binding
  • 1.47162554695064 bayes_pls_golite062009
  • peptidase activity
  • 1.4194137915074 bayes_pls_golite062009
  • transcription regulator activity
  • 1.30988141770642 bayes_pls_golite062009
  • protein binding
  • 1.22565748038754 bayes_pls_golite062009
  • catalytic activity
  • 1.21655087018101 bayes_pls_golite062009
  • DNA binding
  • 1.17130513163489 bayes_pls_golite062009
  • nucleic acid binding
  • 1.16049201286103 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 1.1208666000428 bayes_pls_golite062009
  • transporter activity
  • 1.11833481501707 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
  • 1.02752755983942 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.97575992765505 bayes_pls_golite062009
  • hydrolase activity
  • 0.950393847838778 bayes_pls_golite062009
  • transcription factor activity
  • 0.919430701010326 bayes_pls_golite062009
  • growth factor binding
  • 0.86076618871384 bayes_pls_golite062009
  • cyclin-dependent protein kinase activity
  • 0.499492353295369 bayes_pls_golite062009
  • tubulin binding
  • 0.488928950975855 bayes_pls_golite062009
  • protein serine/threonine/tyrosine kinase activity
  • 0.48345772948903 bayes_pls_golite062009
  • actin binding
  • 0.464111806616899 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.451090007290896 bayes_pls_golite062009
  • magnesium ion binding
  • 0.393328812780268 bayes_pls_golite062009
  • MAP kinase kinase kinase activity
  • 0.37115026509016 bayes_pls_golite062009
  • telethonin binding
  • 0.366817170817532 bayes_pls_golite062009
  • MAP kinase kinase activity
  • 0.35402045013148 bayes_pls_golite062009
  • kinase binding
  • 0.26752427107238 bayes_pls_golite062009
  • MAP kinase activity
  • 0.26024936404169 bayes_pls_golite062009
  • protein complex binding
  • 0.239339759110451 bayes_pls_golite062009
  • transforming growth factor beta receptor activity
  • 0.20643152368029 bayes_pls_golite062009
  • transmembrane receptor protein serine/threonine kinase activity
  • 0.20643152368029 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.205652638854091 bayes_pls_golite062009
  • receptor binding
  • 0.197402253061255 bayes_pls_golite062009
  • microtubule binding
  • 0.196718452862042 bayes_pls_golite062009
  • protein kinase C activity
  • 0.0795689006739899 bayes_pls_golite062009
  • protein kinase binding
  • 0.00674998152095019 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.0040394359628233 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle