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Protein Overview: TOM1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run ASF1 3912: TAP-tagged, strain background includes hpc2(delta) Green EM, et al (2005)
View Run ASF1 3829 - low filter Green EM, et al (2005)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TOM1 Huh WK, et al. (2003)
View Data TOM1 and NOP56 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..746] MSA 2.005001 View MSA. No confident structure predictions are available.
2 View Details [747..1651] deduced N/A No confident structure predictions are available.
3 View Details [1652..1845] MSA 1.30299 View MSA. No confident structure predictions are available.
4 View Details [1846..2170] MSA 29.460997 View MSA. No confident structure predictions are available.
5 View Details [2171..2767] deduced N/A No confident structure predictions are available.
6 View Details [2768..2873] PSI-BLAST 2.30103 Ubiquitin ligase NEDD4 WWIII domain
7 View Details [2874..2951] PSI-BLAST 578.9691 Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)
8 View Details [2952..3049]
[3105..3147]
PSI-BLAST 578.9691 Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)
9 View Details [3050..3104]
[3148..3268]
PSI-BLAST 578.9691 Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5 No functions predicted.
6
Term Confidence Notes
  • transcription regulator activity
  • 2.86383554738706 bayes_pls_golite062009
  • binding
  • 2.62219069341981 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 2.59532734096591 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 2.41863405676058 bayes_pls_golite062009
  • transcription activator activity
  • 2.14675042199891 bayes_pls_golite062009
  • transcription factor binding
  • 2.10967934447529 bayes_pls_golite062009
  • transcription cofactor activity
  • 1.96062029508094 bayes_pls_golite062009
  • histone methyltransferase activity
  • 1.90194027965368 bayes_pls_golite062009
  • transcription coactivator activity
  • 1.85689339141637 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 1.6967322982151 bayes_pls_golite062009
  • protein binding
  • 1.46903005775608 bayes_pls_golite062009
  • protein-lysine N-methyltransferase activity
  • 1.14806422628668 bayes_pls_golite062009
  • histone-lysine N-methyltransferase activity
  • 1.14806422628668 bayes_pls_golite062009
  • lysine N-methyltransferase activity
  • 1.14806422628668 bayes_pls_golite062009
  • protein methyltransferase activity
  • 1.121001087082 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 0.568363753662296 bayes_pls_golite062009
  • catalytic activity
  • 0.210712504691113 bayes_pls_golite062009
  • histone methyltransferase activity (H3-K36 specific)
  • 0.173723075520888 bayes_pls_golite062009
  • transcription repressor activity
  • 0.0876845006692102 bayes_pls_golite062009
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle