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Protein Overview: wht-8

General Information:
Name(s) found: wht-8 / CE24327 [WormBase]
Description(s) found:
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  • WBGene00012925 locus:wht-8 status:Partially_confirmed UniProt:Q9U2D0 protein_id:CAB57891.1 [WormBase]
  • pir||T31543 hypothetical protein Y47D3A.11 - Caenorhabditis elegans [NCBI NR]
  • gi|6018403|emb|CAB57891.1| C. elegans protein Y47D3A.11, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17555936|ref|NP_499442.1| WHiTe (Drosophila) related ABC transporte family member (wht-8) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE24327 WBGene00012925 status:Partially_confirmed TR:Q9U2D0 protein_id:CAB57891.1 [wormpep150.fasta]
  • 24327 WBGene00012925 status:Partially_confirmed TR:Q9U2D0 protein_id:CAB57891.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • white family member, possibly N-myristoylated (3M311) [Caenorhabditis elegans]gi|6018403|emb|CAB57891.1| Hypothetical protein Y47D3A.11 [Caenorhabditis elegans]gi|7509901|pir||T31543 hypothetical protein Y47D3A.11 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9U2D0 protein_id:CAB57891.1 [wormpep115.fasta.reversed]
  • CE24327 status:Predicted TR:Q9U2D0 protein_id:CAB57891.1 [wormpep80.hongbin]
  • CE24327 WBGene00012925 locus:wht-8 status:Partially_confirmed UniProt:Q9U2D0_CAEEL protein_id:CAB57891.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE24327 WBGene00012925 locus:wht-8 status:Partially_confirmed UniProt:Q9U2D0_CAEEL protein_id:CAB57891.1| [wormORF-contam.fasta]
  • Y47D3A.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y47D3A.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE24327 WBGene00012925 locus:wht-8 status:Partially_confirmed TR:Q9U2D0 protein_id:CAB57891.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 547 amino acids

    Gene Ontology:
    Cellular Component: Gram-negative-bacterium-type cell wall [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    outer membrane-bounded periplasmic space [IEALink to PubMed article]
    Biological Process: cell division [IEALink to PubMed article]
    cobalt ion transport [IEALink to PubMed article]
    nitrate transport [IEALink to PubMed article]
    phosphonate transport [IEALink to PubMed article]
    polyamine transport [IEALink to PubMed article]
    cytochrome complex assembly [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    nodulation [IEALink to PubMed article]
    Molecular Function: ATPase activity [IEALink to PubMed article]
    nucleotide binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    ATPase activity, coupled to transmembrane movement of substances [IEALink to PubMed article]
    nitrate transmembrane transporter activity [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]
    polyamine-transporting ATPase activity [IEALink to PubMed article]
    phosphonate transmembrane-transporting ATPase activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASGAGKTT LLNTLLQRNL RGLQVEGEIL VNGQNIGKGV TSVSAYVQQE DLFMGTLTVK  60
   61 EHLDIQAKLR LPPGTSTTAR ATRVNEVMNE MLLEKPRDSR IGVPGIKKGI SGGEMKRLAF 120
  121 ATEMINNPPI IFCDEPTTGL DSHMSLQVVK TLEQMALEKG KTIICTIHQP SSEVVFLAQG 180
  181 RIAFHGAIDE AIHHFSSCGY QVPDHTNPAD YFIDTLAIKP SEAEACKSRC QELCDKFEKS 240
  241 FYNERLTKLM DQTKDVRAMT PHHSATYPVL LYALFYRYML DNIRNPAIMK AKLIQKLFMG 300
  301 LFIGTLFYGL ETDQDGLASY KGALFYYISE LTYSTIFGIQ AFMPADYPPL VREYDDRIYP 360
  361 ISAYYIAKIC SFLPIFTVDG IILVVSSYFL VGFPSDFGVF LRQIFTCMAI EWNVAALGIA 420
  421 VCATAPSYAI AVTVTGPLLT VFSLTGGLFT NIAEMPAWIN WVQYLSWFRY GYESLVVNQF 480
  481 QHDQFANITC NANMNEQLCE KSGPIAIKNF SFDTANLYTN WVAMIYLTII IYIVGYMGLV 540
  541 RRVIANR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 60.69897 Crystal Structure of ATPase subunit of ABC Sugar Transporter
    2 View Details [312..547] Pfam 14.638272 No description for PF01061.15 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  6.58863529263644 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  6.58067278719409 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  6.57974651657836 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  6.57922174989907 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  6.57807080367604 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  6.48406410175216 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  6.48154954364331 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  6.40467109535527 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  6.40151534181487 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  6.38373914253885 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  6.38247436082206 bayes_pls_golite062009
  • ATPase activity
    		•  6.30019941712404 bayes_pls_golite062009
  • hydrolase activity
    		•  5.13885856289543 bayes_pls_golite062009
  • sterol transporter activity
    		•  4.45355165759136 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  3.40690615950081 bayes_pls_golite062009
  • ribonucleotide binding
    		•  3.40594996232845 bayes_pls_golite062009
  • purine nucleotide binding
    		•  3.3669118613715 bayes_pls_golite062009
  • nucleotide binding
    		•  3.33248266870364 bayes_pls_golite062009
  • ATP binding
    		•  3.17398570826788 bayes_pls_golite062009
  • lipid transporter activity
    		•  3.14635082108971 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  3.12628113185041 bayes_pls_golite062009
  • transporter activity
    		•  3.10463051760206 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  3.0710107594224 bayes_pls_golite062009
  • drug transmembrane transporter activity
    		•  2.97119034312001 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.95886887664984 bayes_pls_golite062009
  • cholesterol transporter activity
    		•  2.72457626066894 bayes_pls_golite062009
  • binding
    		•  2.21604035604783 bayes_pls_golite062009
    		• 2.20174656498665 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.91091452720653 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.62884148289979 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.56325751172863 bayes_pls_golite062009
  • DNA binding
    		•  1.53176391519962 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.49517431175162 bayes_pls_golite062009
  • peptide-transporting ATPase activity
    		•  1.37783759788533 bayes_pls_golite062009
  • glycoprotein transporter activity
    		•  1.30536878174919 bayes_pls_golite062009
  • sterol-transporting ATPase activity
    		•  1.30536878174919 bayes_pls_golite062009
  • protein binding
    		•  1.22129154759482 bayes_pls_golite062009
  • peptide transporter activity
    		•  1.19353064661766 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.977237423302079 bayes_pls_golite062009
  • motor activity
    		•  0.87979065815418 bayes_pls_golite062009
  • GTPase activity
    		•  0.83849854735032 bayes_pls_golite062009
  • phospholipid transporter activity
    		•  0.755445322666929 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  0.640772201693186 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.63468044350616 bayes_pls_golite062009
  • GTP binding
    		•  0.621689261700018 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.557919489256916 bayes_pls_golite062009
  • protein transporter activity
    		•  0.498432226280822 bayes_pls_golite062009
  • transcription factor activity
    		•  0.344643343870781 bayes_pls_golite062009
  • syntaxin-13 binding
    		•  0.310540417068989 bayes_pls_golite062009
  • apolipoprotein receptor activity
    		•  0.310540417068989 bayes_pls_golite062009
  • apolipoprotein A-I binding
    		•  0.310540417068989 bayes_pls_golite062009
  • apolipoprotein A-I receptor activity
    		•  0.310540417068989 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.286367085584159 bayes_pls_golite062009
  • signal transducer activity
    		•  0.286367085584159 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  0.213018989352421 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  0.169034229773346 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.123304946374679 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.0775601177068852 bayes_pls_golite062009
  • transcription activator activity
    		•  0.0291047953833683 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle