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Protein Overview: SWS2

General Information:
Name(s) found: SWS2 / YNL081C [SGD]
Description(s) found:
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  • gi|791103|emb|CAA60177.1| unknown [Saccharomyces cerevisiae] [NCBI NR]
  • gi|71064119|gb|AAZ22527.1| Sws2p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|6324248|ref|NP_014318.1| Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency; Sws2p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1730748|sp|P53937.1|SWS2_YEAST RecName: Full=37S ribosomal protein SWS2, mitochondrial; AltName: Full=Sick without securin protein 2 [NCBI NR]
  • gi|1301975|emb|CAA95955.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S53897 probable ribosomal protein S13, mitochondrial - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • (P53937) Putative mitochondrial 40S ribosomal protein YNL081C [Swiss-Prot]
  • 37S ribosomal protein SWS2, mitochondrial OS=Saccharomyces cerevisiae GN=SWS2 PE=1 SV=1 [Swiss-Prot]
  • SWS2 Putative mitochondrial ribosomal protein of the small subunit [mips]
  • Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency [SGD]
  • YNL081C, Chr XIV from 476185-476616, reverse complement [yeast_orfs2]
  • Chr XIV from 476185-476616, reverse complement [yeastorf3.fasta]
  • Chr XIV from 476616-476185, reverse complement [yeastorf5.fasta]
  • SWS2 SGDID:S0005025, Chr XIV from 476618-476187, reverse complement, Uncharacterized ORF [yeastflysequest.fasta]
  • Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein [Saccharomyces cerevisiae]gi|791103|emb|CAA60177.1| unknown [Saccharomyces cerevisiae]gi|1301975|emb|CAA95955.1| unnamed protein product [Sacc [nrdb_11152004_Chlamydomonas]
  • SWS2 SGDID:S000005025, Chr XIV from 476620-476189, reverse complement, Uncharacterized ORF, "Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • SWS2 SGDID:S000005025, Chr XIV from 476620-476189, reverse complement, Verified ORF, "Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • Putative mitochondrial 40S ribosomal protein YNL081C [nr-271106-contam.fasta]
  • Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; Sws2p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unknown [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Sws2p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • SWS2 SGDID:S000005025, Chr XIV from 476621-476190, reverse complement, Verified ORF, "Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency" [SGD_S-cerevisiae_na_01-05-2010_reversed.fasta]
  • [chemostatdb.fasta]
  • 37S ribosomal protein SWS2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWS2 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • SWS2 SGDID:S000005025, Chr XIV from 476619-476188, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency" [yeast-030211-contam.fasta]
  • SWS2 SGDID:S000005025, Chr XIV from 476619-476188, Genome Release 64-2-1, reverse complement, Verified ORF, "Putative mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency; localizes to vacuole in response to H2O2" [20141208_orf_trans.fasta]
  • YNL081C SGDID:S000005025, Chr XIV from 476619-476188, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 143 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    mitochondrion [ISSLink to PubMed article]
    mitochondrial small ribosomal subunit [ISSLink to PubMed article]
    Biological Process: translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVHILGKGF KGKEVIKIAL ASKFYGIGKT TAEKICSKLG FYPWMRMHQL SEPQIMSIAS  60
   61 ELSTMTIEGD ARAIVKDNIA LKRKIGSYSG MRHTLHLPVR GQHTRNNAKT ARKLNKIDRR 120
  121 GIHTFSQAKV QHNPSLWSCI FGK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) MRP1 MRP21 MRP51 MRPS35 MRPS9 NAM9 RSM10 RSM18 RSM22 RSM23 RSM24 RSM25 RSM26 RSM7 SWS2
    View Details Krogan NJ, et al. (2006) CBF1 FYV4 MAM33 MRP1 MRP10 MRP17 MRP21 MRP4 MRP51 MRPL8 MRPS12 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS9 NAM9 NCL1 PET123 RIB4 RSM10 RSM18 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM28 RSM7 SVL3 SWS2 YDR124W YJR096W YKL151C YSP1
    View Details Qiu et al. (2008) IMG1 IMG2 MNP1 MRP1 MRP10 MRP13 MRP17 MRP2 MRP20 MRP21 MRP4 MRP49 MRP51 MRP7 MRPL1 MRPL10 MRPL11 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL38 MRPL39 MRPL40 MRPL44 MRPL49 MRPL50 MRPL6 MRPL8 MRPL9 MRPS12 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS8 MRPS9 NAM9 PET123 PPE1 RSM10 RSM18 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM28 RSM7 RTC6 SWS2 VAR1 YML6 YMR31

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data SWS2 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] PSI-BLAST 142.68867 Ribosomal protein S13
    2 View Details [75..143] PSI-BLAST 142.68867 Ribosomal protein S13

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.75987008608357 bayes_pls_golite062009
  • structural molecule activity
    		•  9.18430883932738 bayes_pls_golite062009
  • catalytic activity
    		•  0.161830442565647 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle