Protein Overview: YJR096W

General Information:
Name(s) found:	YJR096W [SGD]
Description(s) found: Found 27 descriptions. SHOW ALL	Putative xylose and arabinose reductase; member of the aldo-keto reductase (AKR) family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS [SGD]
Organism:	Saccharomyces cerevisiae
Length:	282 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytoplasm [IDA ]
Biological Process:	arabinose catabolic process [IDA][IMP] D-xylose catabolic process [IMP]
Molecular Function:	aldehyde reductase activity [IDA][IGI] aldo-keto reductase activity [IDA][ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPKFYKLSN GFKIPSIALG TYDIPRSQTA EIVYEGVKCG YRHFDTAVLY GNEKEVGDGI  60
   61 IKWLNEDPGN HKREEIFYTT KLWNSQNGYK RAKAAIRQCL NEVSGLQYID LLLIHSPLEG 120
  121 SKLRLETWRA MQEAVDEGLV KSIGVSNYGK KHIDELLNWP ELKHKPVVNQ IEISPWIMRQ 180
  181 ELADYCKSKG LVVEAFAPLC HGYKMTNPDL LKVCKEVDRN PGQVLIRWSL QHGYLPLPKT 240
  241 KTVKRLEGNL AAYNFELSDE QMKFLDHPDA YEPTDWECTD AP

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Krogan NJ, et al. (2006)		CBF1 FYV4 MAM33 MRP1 MRP10 MRP17 MRP21 MRP4 MRP51 MRPL8 MRPS12 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS9 NAM9 NCL1 PET123 RIB4 RSM10 RSM18 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM28 RSM7 SVL3 SWS2 YDR124W YJR096W YKL151C YSP1
View Details	Qiu et al. (2008)		GCY1 GRE3 YJR096W YPR1

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	SPT23	YJR096W	1	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	YJR096W	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..196] [230..253]	PSI-BLAST	525.0	3-alpha-hydroxysteroid dehydrogenase
2	View Details	[197..229] [254..282]	PSI-BLAST	525.0	3-alpha-hydroxysteroid dehydrogenase

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2