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Protein Overview: YFL034W

General Information:
Name(s) found: YFL034W [SGD]
Description(s) found:
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  • gi|836720|dbj|BAA09205.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • gi|14318485|ref|NP_116583.1| Putative integral membrane protein that interacts with Rpp0p, which is a component of the ribosomal stalk; Yfl034wp [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1175941|sp|P43564.1|YFD4_YEAST RecName: Full=Uncharacterized membrane protein YFL034W [NCBI NR]
  • pir||S56220 probable membrane protein YFL034w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • Uncharacterized membrane protein YFL034W OS=Saccharomyces cerevisiae GN=YFL034W PE=1 SV=1 [Swiss-Prot]
  • Protein of unknown function [mips]
  • Putative integral membrane protein that interacts with Rpp0p, which is a component of the ribosomal stalk [SGD]
  • YFL034W, Chr VI from 65475-68696 [yeast_orfs2]
  • Chr VI from 65475-68696 [yeastorf3.fasta]
  • (P43564) Hypothetical 119.5 kDa protein in MOB2-RIM15 intergenic region [4932.FASTACCERV.txt]
  • YFL034W SGDID:S0001860, Chr VI from 65475-68696, Uncharacterized ORF [yeastflysequest.fasta]
  • Possible integral membrane protein that interacts with Rpp0p, which is a component of the ribosomal stalk [Saccharomyces cerevisiae]gi|1175941|sp|P43564|YFD4_YEAST Hypothetical 119.5 kDa protein in MOB2-RIM15 intergenic regiongi|1084697|pir||S56220 prob [nrdb_11152004_Chlamydomonas]
  • YFL034W SGDID:S000001860, Chr VI from 65475-68696, Uncharacterized ORF, "Possible integral membrane protein that interacts with Rpp0p, which is a component of the ribosomal stalk" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YFL034W SGDID:S000001860, Chr VI from 65475-68696, Uncharacterized ORF, "Putative integral membrane protein that interacts with Rpp0p, which is a component of the ribosomal stalk" [yeast-contam.fasta]
  • Putative integral membrane protein that interacts with Rpp0p, which is a component of the ribosomal stalk; Yfl034wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Uncharacterized membrane protein YFL034W [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 1073 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [ISSLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSEEDLGV QLKGLKIARH LKESGEHTDE ESNSSPEHDC GLSNQDDLTV MHTQAKEEVF  60
   61 KRREEDGTRT EDALHEGEAG KEGTGFPSSQ SVCSPNEADS GIDRADKPIL LDPFKSVHDT 120
  121 DPVPGTKSRS NSDSDSDSDD GGWQEMPAVS SFNIYNHRGE LELTSKVRNS EQASETSPTV 180
  181 PPGKNCKSVN DSRFDYTKMA AEQQAQRSYR TNKKTDFLFD HKVLKKKINS SQTSVNLTSS 240
  241 PSTTSLNNEK NNDDDDDDSY DEYEDDVEPV NDLNRDSQLN ITKNLLSDME KFAYVGAINI 300
  301 LANQMCTNLA TLCLCIDIKS HKNLAHRLQF TQKDMAAWKT VVLSRLYDHL GISQEEIVMI 360
  361 EKLSLHKIQL EDLCKCLKTT QSIDNPWEND RDHEEDGIEE TTERMSPNEQ NGSVQASTPD 420
  421 PEQSATPETP KAKQSPLSSD VPGKVLDPEN VKSQDKLNID VAWTIICDLF LICLQSSTYD 480
  481 SRSRTLLINF AKVLNMTSLE ICEFERRVTD SLDMEQSTED QVWDEQDHMR NRRRSKRRKK 540
  541 MAYVALAMVG GSLVLGLSGG LLAPVIGGGI AAGLSTIGIT GATSFLTGVG GTTVVAVSST 600
  601 AIGANIGARG MSKRMGSVRT FEFRPLHNNR RVNLILTVSG WMVGNEDDVR LPFSTVDPVE 660
  661 GDLYSLYWEP EMLKSIGQTV SIVATEIFTT SLQQILGATV LTALISSIQW PMALSKLGYI 720
  721 LDNPWNVSLD RAWSAGKILA DTLIARNLGA RPITLVGFSI GARVIFSCLI ELCKKKALGL 780
  781 IENVYLFGTP AVMKKEQLVM ARSVVSGRFV NGYSDKDWFL AYLFRAAAGG FSAVMGISTI 840
  841 ENVEGIENIN CTEFVDGHLN YRKSMPKLLK RIGIAVLSEE FVEIEEMMNP EEVKRKRKLI 900
  901 NDVDAAQKKL SERKKHNSWV PKWLKPKKSK WKVMVEEAVE EGRDMQDLPE NDVNNNENEN 960
  961 PDEHEGIARQ KRRDAALVDH GALMHELQLI KQAMHEDEIK NKACLPGEDK EVESSNDFLG1020
 1021 ESHYKPPSTP KINPPQSPNN FQLLSAGRTI LPEDDDFDPR GKKKVEFSFP DDI

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) APL2 APL4 APM2 YFL034W
    View Details Krogan NJ, et al. (2006) APL2 APL4 APM1 APM2 APS1 CST26 GAL10 IRC6 YFL034W
    View Details Ho Y, et al. (2002) AMS1 ATG19 GDE1 LAP4 YFL034W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run PAN1 No Comments Toshima J, et al (2006)
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YFL034W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..318] deduced N/A No confident structure predictions are available.
    2 View Details [319..844] MSA 2.011847 View MSA. No confident structure predictions are available.
    3 View Details [845..1073] deduced N/A No confident structure predictions are available.
    4 View Details [447..544] deduced N/A No confident structure predictions are available.
    5 View Details [545..646] FFAS03 1.08 CRYSTAL STRUCTURE OF THE E. COLI ASPARTYL-TRNA SYNTHETASE : TRNAASP : ASPARTYL-ADENYLATE COMPLEX
    6 View Details [647..721] deduced N/A No confident structure predictions are available.
    7 View Details [722..856] FFAS03 1.02 Lipase A
    8 View Details [857..1073] FFAS03 1.08 No description for 2v1yB was found.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle