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Protein Overview: RSP5

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run VAM3 Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). Hao Xu, et al. (2010)
View Run MLP2 #34 Asynchronous SPB prep Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RSP5 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..199] PSI-BLAST 31.69897 Synaptogamin I
2 View Details [200..314] PSI-BLAST 37.67837 Mitotic rotamase PIN1; Mitotic rotamase PIN1, domain 2
3 View Details [315..372] PSI-BLAST 70.264245 Ubiquitin ligase NEDD4 WWIII domain
4 View Details [373..450] ORFEUS 10.59 Ubiquitin ligase NEDD4 WWIII domain
5 View Details [451..494] PSI-BLAST 664.0 Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)
6 View Details [495..592]
[648..690]
PSI-BLAST 664.0 Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)
7 View Details [593..647]
[691..809]
PSI-BLAST 664.0 Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 7.19063870734022 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 6.90783262781184 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 6.09904629433884 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 5.1950291192201 bayes_pls_golite062009
  • ligase activity
  • 4.32965319288714 bayes_pls_golite062009
  • transcription activator activity
  • 3.61296179666474 bayes_pls_golite062009
  • transcription regulator activity
  • 3.2682543222543 bayes_pls_golite062009
  • binding
  • 2.62219069341981 bayes_pls_golite062009
  • protein binding
  • 2.51948432647454 bayes_pls_golite062009
  • transcription factor binding
  • 2.18630749239417 bayes_pls_golite062009
  • transcription cofactor activity
  • 2.07432061489599 bayes_pls_golite062009
  • transcription coactivator activity
  • 2.02433252968502 bayes_pls_golite062009
  • histone methyltransferase activity
  • 1.90194027965368 bayes_pls_golite062009
  • protein-lysine N-methyltransferase activity
  • 1.14806422628668 bayes_pls_golite062009
  • lysine N-methyltransferase activity
  • 1.14806422628668 bayes_pls_golite062009
  • histone-lysine N-methyltransferase activity
  • 1.14806422628668 bayes_pls_golite062009
  • protein methyltransferase activity
  • 1.121001087082 bayes_pls_golite062009
  • catalytic activity
  • 0.210712504691113 bayes_pls_golite062009
  • transcription repressor activity
  • 0.18603158355229 bayes_pls_golite062009
  • histone methyltransferase activity (H3-K36 specific)
  • 0.173723075520888 bayes_pls_golite062009
    3
    Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 7.19063870734022 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 6.90783262781184 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 6.09904629433884 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 5.1950291192201 bayes_pls_golite062009
  • ligase activity
  • 4.32965319288714 bayes_pls_golite062009
  • transcription activator activity
  • 3.61296179666474 bayes_pls_golite062009
  • transcription regulator activity
  • 3.2682543222543 bayes_pls_golite062009
  • binding
  • 2.62219069341981 bayes_pls_golite062009
  • protein binding
  • 2.51948432647454 bayes_pls_golite062009
  • transcription factor binding
  • 2.18630749239417 bayes_pls_golite062009
  • transcription cofactor activity
  • 2.07432061489599 bayes_pls_golite062009
  • transcription coactivator activity
  • 2.02433252968502 bayes_pls_golite062009
  • histone methyltransferase activity
  • 1.90194027965368 bayes_pls_golite062009
  • protein-lysine N-methyltransferase activity
  • 1.14806422628668 bayes_pls_golite062009
  • lysine N-methyltransferase activity
  • 1.14806422628668 bayes_pls_golite062009
  • histone-lysine N-methyltransferase activity
  • 1.14806422628668 bayes_pls_golite062009
  • protein methyltransferase activity
  • 1.121001087082 bayes_pls_golite062009
  • catalytic activity
  • 0.210712504691113 bayes_pls_golite062009
  • transcription repressor activity
  • 0.18603158355229 bayes_pls_golite062009
  • histone methyltransferase activity (H3-K36 specific)
  • 0.173723075520888 bayes_pls_golite062009
    4
    Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 11.7414753295465 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 11.4871643691645 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 10.4323719338452 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 9.13168684685485 bayes_pls_golite062009
  • ligase activity
  • 7.74494807432593 bayes_pls_golite062009
  • sodium channel inhibitor activity
  • 6.01425793895251 bayes_pls_golite062009
  • phosphothreonine binding
  • 5.90497053948475 bayes_pls_golite062009
  • phosphoserine binding
  • 5.90497053948475 bayes_pls_golite062009
  • ion channel inhibitor activity
  • 2.86572445544473 bayes_pls_golite062009
  • channel inhibitor activity
  • 2.86572445544473 bayes_pls_golite062009
  • binding
  • 2.51893471705946 bayes_pls_golite062009
  • protein binding
  • 2.44418607577971 bayes_pls_golite062009
  • transcription regulator activity
  • 2.32249912875549 bayes_pls_golite062009
  • nucleic acid binding
  • 2.12515000812201 bayes_pls_golite062009
  • DNA binding
  • 1.96906809911381 bayes_pls_golite062009
  • SMAD binding
  • 1.72092268696303 bayes_pls_golite062009
  • 1.3844044305632 bayes_pls_golite062009
  • channel regulator activity
  • 1.37005888814694 bayes_pls_golite062009
  • transcription activator activity
  • 1.36023462068212 bayes_pls_golite062009
  • sodium channel regulator activity
  • 1.19047973745862 bayes_pls_golite062009
  • receptor binding
  • 1.15852292149378 bayes_pls_golite062009
  • catalytic activity
  • 1.15152367676155 bayes_pls_golite062009
  • R-SMAD binding
  • 1.09824752083864 bayes_pls_golite062009
  • activin binding
  • 0.883990007327631 bayes_pls_golite062009
  • transcription factor binding
  • 0.803487897091874 bayes_pls_golite062009
  • small conjugating protein binding
  • 0.68109357273955 bayes_pls_golite062009
  • ubiquitin binding
  • 0.60123113960943 bayes_pls_golite062009
  • ubiquitin-ubiquitin ligase activity
  • 0.598436219078807 bayes_pls_golite062009
  • nuclear hormone receptor binding
  • 0.470794254334721 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle