YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SCC2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run ASF1 3908: TAP-tagged, includes hir2(delta) in background Green EM, et al (2005)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

  PROTEIN(S) PUBLICATION
View Data SCC2 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..354] deduced N/A No confident structure predictions are available.
2 View Details [355..1408] MSA 1.007903 View MSA. No confident structure predictions are available.
3 View Details [1409..1493] deduced N/A No confident structure predictions are available.
4 View Details [381..480] MSA 1.033993 View MSA. No confident structure predictions are available.
5 View Details [481..1309] FFAS03 3.13 No description for 2ie3A was found.
6 View Details [1310..1493] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5
Term Confidence Notes
  • binding
  • 2.81296846555705 bayes_pls_golite062009
  • protein transporter activity
  • 2.6734690782599 bayes_pls_golite062009
  • protein binding
  • 1.81870125631028 bayes_pls_golite062009
  • nucleic acid binding
  • 1.78701774446386 bayes_pls_golite062009
  • transporter activity
  • 1.44589191111517 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 1.19535295481088 bayes_pls_golite062009
  • transcription regulator activity
  • 1.08645493064764 bayes_pls_golite062009
  • DNA binding
  • 0.956143892328242 bayes_pls_golite062009
  • protein transmembrane transporter activity
  • 0.824035252349223 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.384349606267362 bayes_pls_golite062009
  • transcription factor activity
  • 0.371244009721798 bayes_pls_golite062009
  • RNA binding
  • 0.369141052569571 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.338017015160581 bayes_pls_golite062009
  • signal sequence binding
  • 0.262155773896291 bayes_pls_golite062009
  • nuclear localization sequence binding
  • 0.19122877456451 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.0946244209704199 bayes_pls_golite062009
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle