YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|30261391, gi|...

General Information:
Name(s) found: gi|30261391 [NCBI NR]
gi|30255245 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|30261391|ref|NP_843768.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30255245|gb|AAP25254.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 345 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: spermidine transport [ISSLink to PubMed article]
    putrescine transport [ISSLink to PubMed article]
    Molecular Function: ATPase activity, coupled to transmembrane movement of substances [ISSLink to PubMed article]
    polyamine-transporting ATPase activity [ISSLink to PubMed article]
    binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTKRLAGA AISFSLVAGC GEKKEELNIY SWADNFDEQV LRDFEKKYNV KINYDKYASN  60
   61 EEMLAKLQAG GAKYDLIQPS DYMVKTMAKM DLLAPLDKKN IPNIENMVSN FKTPAFDPEN 120
  121 KYSLVYTWGV TGIAYNKKYV KEAPTSWTDL WNEKYKGHVT LLNDSREVLG MGLKKNGFSN 180
  181 STKDDAQLKT AATDLQKLLP NLLAFDTDNI KQKFITEDAW IGTVWSGDAA FIAKDNKDVE 240
  241 YVVPKEGGTI WADTLAIPKG AKNKELAEKF MNYLLDEKVS VKNYESIGYS NPNEKAHPLH 300
  301 SKEYRENHMI FLTKEELDRT EWLVDVDDKL KDYDRYWTEL KTKGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..345] PSI-BLAST 65.0 Spermidine/putrescine-binding protein PotD

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • polyamine transmembrane transporter activity
    		•  6.4955392556526 bayes_pls_golite062009
  • polyamine-transporting ATPase activity
    		•  5.55983439723443 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  5.10369591387353 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  5.10318083615538 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  5.10318083615538 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  5.08926597039825 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  5.08835444171664 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  5.0778580713249 bayes_pls_golite062009
  • polyamine binding
    		•  4.52047643422812 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  4.39934929410381 bayes_pls_golite062009
  • transporter activity
    		•  4.36277471796561 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  4.06067446901213 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.05122336499684 bayes_pls_golite062009
  • ATPase activity
    		•  4.04125376161476 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.47889550245964 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  3.25040168593981 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  3.16446457499691 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  3.1010430082527 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  3.08561402450657 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.87472545473244 bayes_pls_golite062009
  • putrescine transmembrane transporter activity
    		•  2.81060956700345 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  2.77148301796671 bayes_pls_golite062009
  • peptide transporter activity
    		•  2.75577307623285 bayes_pls_golite062009
  • molybdate ion transmembrane transporter activity
    		•  2.58578176144479 bayes_pls_golite062009
  • molybdate transmembrane-transporting ATPase activity
    		•  2.58578176144479 bayes_pls_golite062009
  • hydrolase activity
    		•  2.41680852416007 bayes_pls_golite062009
  • amine binding
    		•  2.37157043664258 bayes_pls_golite062009
  • amino acid binding
    		•  2.19962484683312 bayes_pls_golite062009
  • oligopeptide transporter activity
    		•  1.91036692266394 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.70693655091183 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.70643051049474 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.65646853917778 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.63520066802961 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.6341518946909 bayes_pls_golite062009
  • binding
    		•  1.54172013140566 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  1.46567992263504 bayes_pls_golite062009
  • amino acid-transporting ATPase activity
    		•  0.991822522006045 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  0.99134553005852 bayes_pls_golite062009
  • putrescine binding
    		•  0.973416867423461 bayes_pls_golite062009
  • amine-transporting ATPase activity
    		•  0.971052093204841 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.230402103022499 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.119916745111395 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  0.0940079640524907 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  0.00844917716785965 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle