YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261391, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTKRLAGA AISFSLVAGC GEKKEELNIY SWADNFDEQV LRDFEKKYNV KINYDKYASN  60
   61 EEMLAKLQAG GAKYDLIQPS DYMVKTMAKM DLLAPLDKKN IPNIENMVSN FKTPAFDPEN 120
  121 KYSLVYTWGV TGIAYNKKYV KEAPTSWTDL WNEKYKGHVT LLNDSREVLG MGLKKNGFSN 180
  181 STKDDAQLKT AATDLQKLLP NLLAFDTDNI KQKFITEDAW IGTVWSGDAA FIAKDNKDVE 240
  241 YVVPKEGGTI WADTLAIPKG AKNKELAEKF MNYLLDEKVS VKNYESIGYS NPNEKAHPLH 300
  301 SKEYRENHMI FLTKEELDRT EWLVDVDDKL KDYDRYWTEL KTKGK

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	345	0.99