YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: frk-1
Organism: Caenorhabditis elegans
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for frk-1.

Description E-value Query
Range
Subject
Range
FYN_XIPHE - Tyrosine-protein kinase Fyn OS=Xiphophorus helleri GN=fyn PE=2 SV=3
375.0 [0..2] [390..128]

Back

Predicted Domain #1
Region A:
Residues: [1-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTVEKSSNN DASVTDDIRS AEYYHGMVPR QDAEGFLKRE GDFLVRKTEQ MPGKVVLAMS  60
   61 VRVTDELCRH FMLNMDPTSN KFYFEHTHQE STISELINWH MTTKTPISAA SGAKIRRPME 120
  121 RSPWLINHDS IVANKKLGEG AFGDVFIAEL DQGGKQEVAV KTMRAEATRE ARLRFMKEAR 180
  181 LMRKYQHKHV VKLIGVAIHE HPLMIVMEYC PNGSLLSHLK KNKVSLIEKL RFTTEAADGI 240
  241 AYLERSKCIH RDIAARNCLL SAKNELKISD FGMSDNKDEI KDETLEKVPI KWLAPETMQE 300
  301 KVYTHKTDIW TFGVLVWEIY SDGAEPYPGL TKIQTRAKIV VNDYRMKMPD GTHPTVADVV 360
  361 TGTCWQKNPE KRSTMDSIHK KLREFYESKK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
protein kinase activity 5.4586557943719 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.97138602499442 bayes_pls_golite062009
phosphoinositide 3-kinase binding 3.43994026029707 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 3.41480681854114 bayes_pls_golite062009
transmembrane receptor protein kinase activity 3.40140621607334 bayes_pls_golite062009
CD8 receptor binding 3.34636716492159 bayes_pls_golite062009
epidermal growth factor receptor binding 2.9751846707539 bayes_pls_golite062009
protein tyrosine kinase activity 2.8153155526437 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
transmembrane receptor activity 2.59526003830791 bayes_pls_golite062009
ion transmembrane transporter activity 2.52531786618214 bayes_pls_golite062009
cation transmembrane transporter activity 2.46424348876434 bayes_pls_golite062009
molecular transducer activity 2.40586892801446 bayes_pls_golite062009
signal transducer activity 2.40586892801446 bayes_pls_golite062009
receptor activity 2.39311927684508 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.37122853419919 bayes_pls_golite062009
protein binding 2.276111749106 bayes_pls_golite062009
cytoskeletal protein binding 2.12615078788254 bayes_pls_golite062009
receptor signaling protein activity 2.10379226653669 bayes_pls_golite062009
SH2 domain binding 2.08937039830657 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.9016235206634 bayes_pls_golite062009
actin binding 1.87817875565699 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.81249386965144 bayes_pls_golite062009
molecular adaptor activity 1.81145713371725 bayes_pls_golite062009
non-membrane spanning protein tyrosine kinase activity 1.66669268613198 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
SH3/SH2 adaptor activity 1.59474164216385 bayes_pls_golite062009
PTB domain binding 1.56656184134104 bayes_pls_golite062009
growth factor binding 1.53863828216563 bayes_pls_golite062009
MAP kinase kinase activity 1.42275431028856 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
tubulin binding 1.13686658158825 bayes_pls_golite062009
transporter activity 1.11833481501707 bayes_pls_golite062009
transforming growth factor beta receptor activity 1.10045286406485 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 1.10045286406485 bayes_pls_golite062009
cation channel activity 1.04999722123563 bayes_pls_golite062009
insulin receptor substrate binding 0.98689034826741 bayes_pls_golite062009
transmembrane transporter activity 0.97575992765505 bayes_pls_golite062009
protein binding, bridging 0.83823250804321 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
actin filament binding 0.794152600084 bayes_pls_golite062009
fibroblast growth factor receptor activity 0.75189004129952 bayes_pls_golite062009
microtubule binding 0.734274677384472 bayes_pls_golite062009
substrate-specific transporter activity 0.705905455086486 bayes_pls_golite062009
structural constituent of cytoskeleton 0.612883428421652 bayes_pls_golite062009
JUN kinase kinase kinase kinase activity 0.546647574638943 bayes_pls_golite062009
insulin binding 0.546269851452869 bayes_pls_golite062009
activin binding 0.510364757301021 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.499492353295369 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
enzyme binding 0.46284745266176 bayes_pls_golite062009
protein kinase C activity 0.41587987561486 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
3-phosphoinositide-dependent protein kinase binding 0.372842462336059 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
phosphotyrosine binding 0.311079584914389 bayes_pls_golite062009
channel activity 0.287189255116606 bayes_pls_golite062009
passive transmembrane transporter activity 0.287189255116606 bayes_pls_golite062009
kinase binding 0.26752427107238 bayes_pls_golite062009
substrate-specific channel activity 0.261869836686301 bayes_pls_golite062009
ion channel activity 0.241519346930618 bayes_pls_golite062009
protein complex binding 0.239339759110451 bayes_pls_golite062009
insulin receptor activity 0.188254408239569 bayes_pls_golite062009
cell adhesion molecule binding 0.150740450460731 bayes_pls_golite062009
JUN kinase kinase kinase activity 0.0613131034808199 bayes_pls_golite062009
transforming growth factor beta receptor activity, type I 0.0506751594607393 bayes_pls_golite062009
cation binding 0.046173055856133 bayes_pls_golite062009
metal ion binding 0.046173055856133 bayes_pls_golite062009
ion binding 0.0389662058697694 bayes_pls_golite062009
protein kinase binding 0.00674998152095019 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle