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View Structure Prediction Details

Protein: FK506-bp1-PA
Organism: Drosophila melanogaster
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FK506-bp1-PA.

Description E-value Query
Range
Subject
Range
gi|600424, gi|10... - gi|600424|emb|CAA86996.1| FKBP39 [Drosophila melanogaster], pir||JC4090 FK506-binding 39k protein - ...
255.0 [0..1] [357..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMFWGLNMK PERKYSQTII KSFHISGVAL DKGQEAKLYL AAEKQEYIVA TVTKAIPQVA  60
   61 LDLNFSKGDR IMFYTAGDAS VSLLGYLHDI DS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.58
Match: 1nlqA
Description: Chromatin decondensation protein 1 (Crp1, Nlp)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
histone binding 3.35045437512493 bayes_pls_golite062009
binding 2.31105760892804 bayes_pls_golite062009
unfolded protein binding 1.82337497151874 bayes_pls_golite062009
transcription regulator activity 1.50414652342961 bayes_pls_golite062009
DNA binding 1.3333188254253 bayes_pls_golite062009
nucleic acid binding 1.22112424514163 bayes_pls_golite062009
protein binding 1.071077076756 bayes_pls_golite062009
transcription factor binding 0.663916219022994 bayes_pls_golite062009
enzyme binding 0.420979974123408 bayes_pls_golite062009
catalytic activity 0.290929394811364 bayes_pls_golite062009
ribonucleoprotein binding 0.290017406252516 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.237741029116502 bayes_pls_golite062009
pyrophosphatase activity 0.196866743343878 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.186970052809736 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.1843930975799 bayes_pls_golite062009
ATPase activity, coupled 0.0973531211151839 bayes_pls_golite062009
transcription activator activity 0.0172981287467382 bayes_pls_golite062009
NF-kappaB binding 0.00132024988427304 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [93-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDDEDDDQMT IENLLNSKAI KNSKKSEDDE DENESGEEDE EDTDDDSQII EEYESFLENG  60
   61 EEEDDDDVDE DNEESGEEDE QDSDDSEAEE EQPKAKVAKL SPGASAKKSG KEQNGVAKKE 120
  121 EAKQQQKKKE KPEAKKEQPK AKEPAKQQPA SKDPRTITGG VKIVDQVVGK GEEAKQGKRV 180
  181 SVYYIGRLQS NNKTFDSLLK GKPFKFALGG GEVIKGWDVG VAGMKVGGKR VITCPPHMAY 240
  241 GARGAPPKIG PNSTLVFEVE LKAVH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.221849
Match: 1fd9A
Description: Macrophage infectivity potentiator protein (MIP)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
intracellular ligand-gated calcium channel activity 10.9968443145942 bayes_pls_golite062009
ryanodine-sensitive calcium-release channel activity 10.9968443145942 bayes_pls_golite062009
macrolide binding 7.31599503004442 bayes_pls_golite062009
FK506 binding 7.22442625476031 bayes_pls_golite062009
metal ion transmembrane transporter activity 6.74926751944787 bayes_pls_golite062009
calcium channel activity 6.4374377859142 bayes_pls_golite062009
cation channel activity 6.06732269872248 bayes_pls_golite062009
ion channel activity 5.45007096522107 bayes_pls_golite062009
passive transmembrane transporter activity 5.32426176964634 bayes_pls_golite062009
channel activity 5.32426176964634 bayes_pls_golite062009
substrate-specific channel activity 5.28960420749143 bayes_pls_golite062009
gated channel activity 5.28074654906904 bayes_pls_golite062009
peptidyl-prolyl cis-trans isomerase activity 4.0615867467963 bayes_pls_golite062009
cis-trans isomerase activity 3.99265212272703 bayes_pls_golite062009
ligand-gated channel activity 3.34717828007833 bayes_pls_golite062009
ligand-gated ion channel activity 3.34717828007833 bayes_pls_golite062009
ion transmembrane transporter activity 2.6566793500337 bayes_pls_golite062009
cation transmembrane transporter activity 2.61794461605199 bayes_pls_golite062009
calcium-release channel activity 2.58969194870156 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.47257819150887 bayes_pls_golite062009
isomerase activity 2.31710030777753 bayes_pls_golite062009
transcription regulator activity 1.712368250919 bayes_pls_golite062009
binding 1.63170667962375 bayes_pls_golite062009
molecular transducer activity 1.35482339720806 bayes_pls_golite062009
signal transducer activity 1.35482339720806 bayes_pls_golite062009
drug binding 1.28204013795445 bayes_pls_golite062009
transporter activity 1.25197125648774 bayes_pls_golite062009
transmembrane transporter activity 1.03909235910355 bayes_pls_golite062009
catalytic activity 0.885282592863018 bayes_pls_golite062009
receptor activity 0.857814413677739 bayes_pls_golite062009
substrate-specific transporter activity 0.789390402522536 bayes_pls_golite062009
intracellular ligand-gated ion channel activity 0.727019445105701 bayes_pls_golite062009
transmembrane receptor activity 0.725838740508674 bayes_pls_golite062009
kinase activity 0.672317708125682 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.655205651562943 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.575514956833065 bayes_pls_golite062009
protein kinase activity 0.377540111031875 bayes_pls_golite062009
transferase activity 0.33716295972018 bayes_pls_golite062009
unfolded protein binding 0.27473817613726 bayes_pls_golite062009
histone binding 0.221748741603068 bayes_pls_golite062009
transcription elongation regulator activity 0.21145105012677 bayes_pls_golite062009
protein binding 0.0371998661994551 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle