| Protein: | gi|20140914, gi|... |
| Organism: | Homo sapiens |
| Length: | 593 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20140914, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [8..593] | [215..800] |
|
|
0.0 | [2..593] | [74..676] |
|
|
0.0 | [70..593] | [2..525] |
|
|
0.0 | [84..593] | [48..572] |
|
|
0.0 | [80..593] | [200..728] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 AAAARGRCLP CSLPSAIAQP HLCPASALCS RRPGLGQPGQ PPSSPHAALA SSSPPSPPPP 60
61 ARGRALPPMV SRPEPEG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [78-217] |
1 11 21 31 41 51
| | | | | |
1 EAMDAELAVA PPGCSHLGSF KVDNWKQNLR AIYQCFVWSG TAEARKRKAK SCICHVCGVH 60
61 LNRLHSCLYC VFFGCFTKKH IHEHAKAKRH NLAIDLMYGG IYCFLCQDYI YDKDMEIIAK 120
121 EEQRKAWKMQ GVGEKFSTWE
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 2g43A |
| Description: | No description for 2g43A was found. |
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.97121728620188 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 5.78935175140238 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.75377804653841 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 3.4560986989594 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 3.40436079043913 | bayes_pls_golite062009 |
| binding | 2.78710909602478 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 2.7771990270637 | bayes_pls_golite062009 |
| transcription regulator activity | 2.72498741013971 | bayes_pls_golite062009 |
| protein binding | 2.64803540957326 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 2.57382484274962 | bayes_pls_golite062009 |
| ligase activity | 2.30828657077565 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 2.27286633653932 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 2.11206038007886 | bayes_pls_golite062009 |
| nucleic acid binding | 2.01888784395048 | bayes_pls_golite062009 |
| DNA binding | 2.00904221080834 | bayes_pls_golite062009 |
| transcription activator activity | 1.45530270292081 | bayes_pls_golite062009 |
| transcription factor activity | 1.22579085356684 | bayes_pls_golite062009 |
| transcription factor binding | 1.11842175076436 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 1.04342463991885 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.926364718530146 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.90321253993065 | bayes_pls_golite062009 |
| hydrolase activity | 0.52386813728704 | bayes_pls_golite062009 |
| transcription repressor activity | 0.350170315296021 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.255669498391574 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.233838999434784 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
|
Region A: Residues: [218-593] |
1 11 21 31 41 51
| | | | | |
1 PTKRELELLK HNPKRRKITS NCTIGLRGLI NLGNTCFMNC IVQALTHTPL LRDFFLSDRH 60
61 RCEMQSPSSC LVCEMSSLFQ EFYSGHRSPH IPYKLLHLVW THARHLAGYE QQDAHEFLIA 120
121 ALDVLHRHCK GDDNGKKANN PNHCNCIIDQ IFTGGLQSDV TCQVCHGVST TIDPFWDISL 180
181 DLPGSSTPFW PLSPGSEGNV VNGESHVSGT TTLTDCLRRF TRPEHLGSSA KIKCSGCHSY 240
241 QESTKQLTMK KLPIVACFHL KRFEHSAKLR RKITTYVSFP LELDMTPFMA SSKESRMNGQ 300
301 YQQPTDSLNN DNKYSLFAVV NHQGTLESGH YTSFIRQHKD QWFKCDDAII TKASIKDVLD 360
361 SEGYLLFYHK QFLEYE
|
| Detection Method: | |
| Confidence: | 62.045757 |
| Match: | 2ibiA |
| Description: | No description for 2ibiA was found. |
| Term | Confidence | Notes |
| cysteine-type peptidase activity | 6.54685807643041 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 6.39247995905454 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 5.98024578817189 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 5.91394445088241 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 5.72435045666828 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 5.72435045666828 | bayes_pls_golite062009 |
| N-acyltransferase activity | 5.54975627252977 | bayes_pls_golite062009 |
| acetyltransferase activity | 4.98167814132869 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 4.63274143638005 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 4.1832081096766 | bayes_pls_golite062009 |
| acyltransferase activity | 4.01951010659818 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.96057134514922 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 2.96735553959103 | bayes_pls_golite062009 |
| peptidase activity | 2.8192612691912 | bayes_pls_golite062009 |
| hydrolase activity | 2.66167923792227 | bayes_pls_golite062009 |
| SUMO-specific protease activity | 2.65263825059319 | bayes_pls_golite062009 |
| endopeptidase activity | 2.56654871607946 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 2.55227247835105 | bayes_pls_golite062009 |
| transcription regulator activity | 2.13534310479552 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.13397229861051 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| DNA binding | 1.95013248594294 | bayes_pls_golite062009 |
| protein binding | 1.92445772322782 | bayes_pls_golite062009 |
| binding | 1.92046698500094 | bayes_pls_golite062009 |
| tubulin binding | 1.85112496470487 | bayes_pls_golite062009 |
| microtubule binding | 1.82320858139311 | bayes_pls_golite062009 |
| nucleic acid binding | 1.74961503597682 | bayes_pls_golite062009 |
| transcription activator activity | 1.24058404587058 | bayes_pls_golite062009 |
| transcription factor activity | 1.20242512567523 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| NEDD8-specific protease activity | 0.687958315289315 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.467924587720185 | bayes_pls_golite062009 |
| structural molecule activity | 0.297752217869698 | bayes_pls_golite062009 |
| signal transducer activity | 0.26868506520228 | bayes_pls_golite062009 |
| molecular transducer activity | 0.26868506520228 | bayes_pls_golite062009 |
| calcium-dependent cysteine-type endopeptidase activity | 0.196538841514154 | bayes_pls_golite062009 |
| ligase activity | 0.109097233197606 | bayes_pls_golite062009 |
| transferase activity | 0.0852393573521809 | bayes_pls_golite062009 |
