| Protein: | OTU1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 301 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OTU1.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-98 | [1..301] | [1..301] |
|
|
4.0E-80 | [1..299] | [4..328] |
|
|
4.0E-72 | [5..299] | [1..346] |
|
|
4.0E-55 | [106..299] | [2..206] |
|
|
1.0E-43 | [66..239] | [167..345] |
|
|
1.0E-42 | [52..239] | [5..206] |
|
|
7.0E-42 | [52..239] | [144..350] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MKLKVTGAGI NQVVTLKQDA TLNDLIEHIN VDVKTMRFGY PPQRINLQGE DASLGQTQLD 60
61 ELGINSGEKI TIESSDSNES FSLPPPQPKP KRVL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| cysteine-type peptidase activity | 6.54685807643041 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 6.39247995905454 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 5.91394445088241 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 4.1832081096766 | bayes_pls_golite062009 |
| peptidase activity | 3.28868056127375 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.01472402774099 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 2.96735553959103 | bayes_pls_golite062009 |
| SUMO-specific protease activity | 2.65263825059319 | bayes_pls_golite062009 |
| hydrolase activity | 2.29464693834116 | bayes_pls_golite062009 |
| endopeptidase activity | 2.26699762664334 | bayes_pls_golite062009 |
| transcription regulator activity | 2.13534310479552 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| DNA binding | 1.95013248594294 | bayes_pls_golite062009 |
| binding | 1.92046698500094 | bayes_pls_golite062009 |
| nucleic acid binding | 1.74961503597682 | bayes_pls_golite062009 |
| transcription factor activity | 1.20242512567523 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| protein binding | 0.874003454509364 | bayes_pls_golite062009 |
| NEDD8-specific protease activity | 0.687958315289315 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.467924587720185 | bayes_pls_golite062009 |
| calcium-dependent cysteine-type endopeptidase activity | 0.196538841514154 | bayes_pls_golite062009 |
| transferase activity | 0.0852393573521809 | bayes_pls_golite062009 |
|
Region A: Residues: [95-232] |
1 11 21 31 41 51
| | | | | |
1 KSTEMSIGGS GENVLSVHPV LDDNSCLFHA IAYGIFKQDS VRDLREMVSK EVLNNPVKFN 60
61 DAILDKPNKD YAQWILKMES WGGAIEIGII SDALAVAIYV VDIDAVKIEK FNEDKFDNYI 120
121 LILFNGIHYD SLTMNEFK
|
| Detection Method: | |
| Confidence: | 38.79588 |
| Match: | PF02338 |
| Description: | OTU-like cysteine protease |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transcription regulator activity | 4.47951889934838 | bayes_pls_golite062009 |
| DNA binding | 4.31051339571017 | bayes_pls_golite062009 |
| nucleic acid binding | 4.04689255235626 | bayes_pls_golite062009 |
| transcription factor activity | 3.28758716579796 | bayes_pls_golite062009 |
| binding | 2.99742524370422 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.05542379535543 | bayes_pls_golite062009 |
| transcription activator activity | 1.97757778483124 | bayes_pls_golite062009 |
| transcription repressor activity | 1.44763794968807 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.26862497534835 | bayes_pls_golite062009 |
| transcription factor binding | 1.23738346570539 | bayes_pls_golite062009 |
| chromatin binding | 1.10179307236186 | bayes_pls_golite062009 |
| protein binding | 0.952480850696098 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.776754909146767 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.627794176881836 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
|
Region A: Residues: [233-301] |
1 11 21 31 41 51
| | | | | |
1 TVFNKNQPES DDVLTAALQL ASNLKQTGYS FNTHKAQIKC NTCQMTFVGE REVARHAEST 60
61 GHVDFGQNR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
