From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.091] [SVM Score: 0.500494384497] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
actin filament | 2.859E-3 | 2 | 9 | 1 | 6292 |
DNA helicase complex | 3.4937E-3 | 2 | 11 | 1 | 6292 |
Ino80 complex | 3.4937E-3 | 2 | 11 | 1 | 6292 |
H4/H2A histone acetyltransferase complex | 4.4455E-3 | 2 | 14 | 1 | 6292 |
NuA4 histone acetyltransferase complex | 4.4455E-3 | 2 | 14 | 1 | 6292 |
Swr1 complex | 4.7627E-3 | 2 | 15 | 1 | 6292 |
cellular bud neck contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
actomyosin contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
D-lactate dehydrogenase (cytochrome) activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor | 1.2712E-3 | 2 | 4 | 1 | 6292 |
lactate dehydrogenase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |