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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Hat2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

histone acetyltransferase complex 1.4276E-4 3 44 2 6292
nucleoplasm part 4.414E-3 3 245 2 6292
nucleoplasm 5.1161E-3 3 264 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

histone acetylation 9.5151E-5 3 36 2 6292
protein amino acid acetylation 1.5615E-4 3 46 2 6292
chromatin silencing at telomere 2.2383E-4 3 55 2 6292
protein amino acid acylation 2.5779E-4 3 59 2 6292
covalent chromatin modification 5.7496E-4 3 88 2 6292
histone modification 5.7496E-4 3 88 2 6292
negative regulation of gene expression, epigenetic 7.4253E-4 3 100 2 6292
gene silencing 7.4253E-4 3 100 2 6292
regulation of gene expression, epigenetic 7.4253E-4 3 100 2 6292
chromatin silencing 7.4253E-4 3 100 2 6292
negative regulation of transcription, DNA-dependent 1.8258E-3 3 157 2 6292
negative regulation of RNA metabolic process 1.849E-3 3 158 2 6292
negative regulation of transcription 1.9912E-3 3 164 2 6292
negative regulation of gene expression 1.9912E-3 3 164 2 6292
chromatin modification 2.089E-3 3 168 2 6292
negative regulation of macromolecule biosynthetic process 2.2655E-3 3 175 2 6292
negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 2.3959E-3 3 180 2 6292
negative regulation of nitrogen compound metabolic process 2.3959E-3 3 180 2 6292
negative regulation of biosynthetic process 2.6396E-3 3 189 2 6292
negative regulation of cellular biosynthetic process 2.6396E-3 3 189 2 6292
negative regulation of macromolecule metabolic process 2.7234E-3 3 192 2 6292
pentose-phosphate shunt, oxidative branch 2.8585E-3 3 6 1 6292
chromatin organization 3.0416E-3 3 203 2 6292
negative regulation of cellular metabolic process 3.2225E-3 3 209 2 6292
negative regulation of metabolic process 3.2531E-3 3 210 2 6292
negative regulation of cellular process 4.5939E-3 3 250 2 6292
negative regulation of biological process 4.7035E-3 3 253 2 6292
pentose-phosphate shunt 5.7116E-3 3 12 1 6292
pentose metabolic process 6.1865E-3 3 13 1 6292
NADPH regeneration 7.136E-3 3 15 1 6292
NADP metabolic process 8.5592E-3 3 18 1 6292
post-translational protein modification 9.2699E-3 3 357 2 6292
regulation of transcription, DNA-dependent 9.321E-3 3 358 2 6292
regulation of RNA metabolic process 9.5782E-3 3 363 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

histone binding 1.3776E-5 3 14 2 6292
phosphogluconate dehydrogenase (decarboxylating) activity 9.5344E-4 3 2 1 6292

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