| From Publication: | Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22. |
| Notes: | From the published set of protein complexes (core proteins only) |
| Complex Size: | 4 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase complex | 1.7031E-7 | 4 | 23 | 3 | 6292 |
| chromatin remodeling complex | 1.4946E-5 | 4 | 99 | 3 | 6292 |
| nucleoplasm part | 2.2664E-4 | 4 | 245 | 3 | 6292 |
| nucleoplasm | 2.8316E-4 | 4 | 264 | 3 | 6292 |
| nuclear lumen | 1.404E-3 | 4 | 453 | 3 | 6292 |
| organelle lumen | 4.2376E-3 | 4 | 660 | 3 | 6292 |
| intracellular organelle lumen | 4.2376E-3 | 4 | 660 | 3 | 6292 |
| membrane-enclosed lumen | 5.0309E-3 | 4 | 700 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase activity | 4.7646E-7 | 4 | 32 | 3 | 6292 |
| protein deacetylase activity | 4.7646E-7 | 4 | 32 | 3 | 6292 |
| deacetylase activity | 6.2849E-7 | 4 | 35 | 3 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.6583E-6 | 4 | 48 | 3 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 7.847E-6 | 4 | 80 | 3 | 6292 |
| glutamate-5-semialdehyde dehydrogenase activity | 6.3573E-4 | 4 | 1 | 1 | 6292 |