| From Publication: | Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22. |
| Notes: | From the published set of protein complexes (core proteins only) |
| Complex Size: | 9 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA-directed RNA polymerase II, holoenzyme | 1.7889E-19 | 9 | 56 | 9 | 6292 |
| DNA-directed RNA polymerase II, core complex | 9.0058E-16 | 9 | 12 | 6 | 6292 |
| nucleoplasm part | 1.7837E-13 | 9 | 245 | 9 | 6292 |
| nucleoplasm | 3.5315E-13 | 9 | 264 | 9 | 6292 |
| RNA polymerase complex | 7.1205E-13 | 9 | 31 | 6 | 6292 |
| nuclear DNA-directed RNA polymerase complex | 7.1205E-13 | 9 | 31 | 6 | 6292 |
| DNA-directed RNA polymerase complex | 7.1205E-13 | 9 | 31 | 6 | 6292 |
| nuclear lumen | 4.8255E-11 | 9 | 453 | 9 | 6292 |
| organelle lumen | 1.4638E-9 | 9 | 660 | 9 | 6292 |
| intracellular organelle lumen | 1.4638E-9 | 9 | 660 | 9 | 6292 |
| membrane-enclosed lumen | 2.4937E-9 | 9 | 700 | 9 | 6292 |
| nuclear part | 1.5218E-7 | 9 | 1103 | 9 | 6292 |
| protein complex | 2.0019E-7 | 9 | 1137 | 9 | 6292 |
| macromolecular complex | 5.3146E-6 | 9 | 1635 | 9 | 6292 |
| transcription factor TFIIF complex | 5.4528E-6 | 9 | 3 | 2 | 6292 |
| nucleus | 3.9292E-5 | 9 | 2041 | 9 | 6292 |
| organelle part | 1.0749E-4 | 9 | 2282 | 9 | 6292 |
| intracellular organelle part | 1.0749E-4 | 9 | 2282 | 9 | 6292 |
| transcription factor complex | 4.2943E-3 | 9 | 71 | 2 | 6292 |
| membrane-bounded organelle | 9.9391E-3 | 9 | 3771 | 9 | 6292 |
| intracellular membrane-bounded organelle | 9.9391E-3 | 9 | 3771 | 9 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA polymerase activity | 1.299E-12 | 9 | 34 | 6 | 6292 |
| DNA-directed RNA polymerase activity | 1.299E-12 | 9 | 34 | 6 | 6292 |
| nucleotidyltransferase activity | 2.607E-8 | 9 | 168 | 6 | 6292 |
| transferase activity, transferring phosphorus-containing groups | 6.0378E-6 | 9 | 420 | 6 | 6292 |
| transferase activity | 2.4256E-4 | 9 | 797 | 6 | 6292 |
| general RNA polymerase II transcription factor activity | 3.502E-3 | 9 | 64 | 2 | 6292 |