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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Piccolo NuA4 histone acetyltransferase complex 1.5158E-7 2 3 2 6292
NuA4 histone acetyltransferase complex 4.5979E-6 2 14 2 6292
H4/H2A histone acetyltransferase complex 4.5979E-6 2 14 2 6292
histone acetyltransferase complex 4.7798E-5 2 44 2 6292
nucleoplasm part 1.5102E-3 2 245 2 6292
nucleoplasm 1.7541E-3 2 264 2 6292
nuclear lumen 5.1728E-3 2 453 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

histone acetylation 3.1832E-5 2 36 2 6292
protein amino acid acetylation 5.2295E-5 2 46 2 6292
protein amino acid acylation 8.6451E-5 2 59 2 6292
covalent chromatin modification 1.9342E-4 2 88 2 6292
histone modification 1.9342E-4 2 88 2 6292
chromatin modification 7.0879E-4 2 168 2 6292
DNA repair 9.2646E-4 2 192 2 6292
chromatin organization 1.036E-3 2 203 2 6292
regulation of transcription from RNA polymerase II promoter 1.3075E-3 2 228 2 6292
response to DNA damage stimulus 1.4011E-3 2 236 2 6292
cellular response to stress 2.1173E-3 2 290 2 6292
transcription from RNA polymerase II promoter 2.8267E-3 2 335 2 6292
post-translational protein modification 3.2108E-3 2 357 2 6292
regulation of transcription, DNA-dependent 3.2288E-3 2 358 2 6292
regulation of RNA metabolic process 3.3198E-3 2 363 2 6292
cellular response to stimulus 3.6193E-3 2 379 2 6292
regulation of transcription 3.7155E-3 2 384 2 6292
regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 4.3405E-3 2 415 2 6292
regulation of nitrogen compound metabolic process 4.3615E-3 2 416 2 6292
regulation of gene expression 4.9915E-3 2 445 2 6292
regulation of macromolecule biosynthetic process 5.2416E-3 2 456 2 6292
regulation of cellular biosynthetic process 5.6164E-3 2 472 2 6292
regulation of biosynthetic process 5.6402E-3 2 473 2 6292
regulation of macromolecule metabolic process 6.004E-3 2 488 2 6292
response to stress 6.2277E-3 2 497 2 6292
protein modification process 6.278E-3 2 499 2 6292
transcription, DNA-dependent 6.3792E-3 2 503 2 6292
RNA biosynthetic process 6.5067E-3 2 508 2 6292
regulation of primary metabolic process 6.6615E-3 2 514 2 6292
regulation of cellular metabolic process 7.2445E-3 2 536 2 6292
regulation of metabolic process 7.5452E-3 2 547 2 6292
transcription 7.6839E-3 2 552 2 6292
chromosome organization 7.7677E-3 2 555 2 6292
macromolecule modification 8.1649E-3 2 569 2 6292
DNA metabolic process 8.631E-3 2 585 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

histone acetyltransferase activity 6.8716E-6 2 17 2 6292
lysine N-acetyltransferase activity 6.8716E-6 2 17 2 6292
N-acetyltransferase activity 2.6678E-5 2 33 2 6292
N-acyltransferase activity 3.552E-5 2 38 2 6292
acetyltransferase activity 6.1895E-5 2 50 2 6292
transferase activity, transferring acyl groups other than amino-acyl groups 2.1151E-4 2 92 2 6292
acyltransferase activity 2.1151E-4 2 92 2 6292
transferase activity, transferring acyl groups 2.8654E-4 2 107 2 6292

YRC Informatics Platform - Version 3.0
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