YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Noc4p-Nop14p complex 1.5888E-3 5 2 1 6292
Noc complex 3.9682E-3 5 5 1 6292
preribosome, small subunit precursor 4.7604E-3 5 6 1 6292
ribonucleoprotein complex 4.783E-3 5 514 3 6292
telomere cap complex 8.7135E-3 5 11 1 6292
nuclear telomere cap complex 8.7135E-3 5 11 1 6292
nuclear envelope 9.3452E-3 5 199 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of transcription 2.0564E-3 5 384 3 6292
regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 2.5772E-3 5 415 3 6292
regulation of nitrogen compound metabolic process 2.5953E-3 5 416 3 6292
regulation of gene expression 3.1553E-3 5 445 3 6292
regulation of macromolecule biosynthetic process 3.3863E-3 5 456 3 6292
regulation of cellular biosynthetic process 3.7412E-3 5 472 3 6292
regulation of biosynthetic process 3.7641E-3 5 473 3 6292
regulation of macromolecule metabolic process 4.1189E-3 5 488 3 6292
regulation of primary metabolic process 4.783E-3 5 514 3 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
regulation of cellular metabolic process 5.3949E-3 5 536 3 6292
regulation of metabolic process 5.7186E-3 5 547 3 6292
transcription 5.8697E-3 5 552 3 6292
negative regulation of transcription, DNA-dependent 5.8881E-3 5 157 2 6292
negative regulation of RNA metabolic process 5.9617E-3 5 158 2 6292
negative regulation of transcription 6.4122E-3 5 164 2 6292
negative regulation of gene expression 6.4122E-3 5 164 2 6292
gene expression 7.2106E-3 5 1283 4 6292
negative regulation of macromolecule biosynthetic process 7.2782E-3 5 175 2 6292
negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 7.6888E-3 5 180 2 6292
negative regulation of nitrogen compound metabolic process 7.6888E-3 5 180 2 6292
negative regulation of biosynthetic process 8.4546E-3 5 189 2 6292
negative regulation of cellular biosynthetic process 8.4546E-3 5 189 2 6292
negative regulation of macromolecule metabolic process 8.7174E-3 5 192 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein binding 5.552E-3 5 7 1 6292
telomeric DNA binding 9.5026E-3 5 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle