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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 10 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial proton-transporting ATP synthase, central stalk 4.7611E-3 10 3 1 6292
proton-transporting ATP synthase, central stalk 4.7611E-3 10 3 1 6292
proton-transporting ATP synthase complex, catalytic core F(1) 7.9239E-3 10 5 1 6292
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) 7.9239E-3 10 5 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleotide-sugar biosynthetic process 3.1764E-3 10 2 1 6292
mannose biosynthetic process 3.1764E-3 10 2 1 6292
GDP-mannose metabolic process 3.1764E-3 10 2 1 6292
GDP-mannose biosynthetic process 3.1764E-3 10 2 1 6292
positive regulation of transcription by galactose 7.9239E-3 10 5 1 6292
positive regulation of transcription by carbon catabolites 7.9239E-3 10 5 1 6292
regulation of transcription by galactose 7.9239E-3 10 5 1 6292
mannose metabolic process 9.5019E-3 10 6 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mannose-6-phosphate isomerase activity 1.5893E-3 10 1 1 6292
ornithine carbamoyltransferase activity 3.1764E-3 10 2 1 6292
carboxyl- or carbamoyltransferase activity 4.7611E-3 10 3 1 6292
xenobiotic-transporting ATPase activity 6.3436E-3 10 4 1 6292
xenobiotic transporter activity 6.3436E-3 10 4 1 6292
poly(A) RNA binding 7.9239E-3 10 5 1 6292
single-stranded RNA binding 7.9239E-3 10 5 1 6292
poly-purine tract binding 7.9239E-3 10 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle