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View Protein Complex Details

Complex Overview

From Publication: Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44
Notes: MIPS hand-curated complex set. MIPS complex ID: 475.05
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear cohesin complex 1.1632E-20 6 6 6 6292
cohesin complex 1.1632E-20 6 6 6 6292
condensed nuclear chromosome 5.4686E-12 6 86 6 6292
condensed chromosome 9.4706E-12 6 94 6 6292
nuclear chromosome part 7.0178E-10 6 190 6 6292
nuclear chromosome 2.1238E-9 6 228 6 6292
chromosomal part 2.6859E-9 6 237 6 6292
chromosome 6.4695E-9 6 274 6 6292
non-membrane-bounded organelle 1.2371E-5 6 959 6 6292
intracellular non-membrane-bounded organelle 1.2371E-5 6 959 6 6292
nuclear part 2.8697E-5 6 1103 6 6292
protein complex 3.4445E-5 6 1137 6 6292
macromolecular complex 3.0579E-4 6 1635 6 6292
nucleus 1.1592E-3 6 2041 6 6292
organelle part 2.2664E-3 6 2282 6 6292
intracellular organelle part 2.2664E-3 6 2282 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sister chromatid cohesion 1.054E-14 6 32 6 6292
mitotic sister chromatid cohesion 2.4548E-12 6 23 5 6292
chromosome segregation 6.3085E-11 6 128 6 6292
mitotic sister chromatid segregation 6.4825E-10 6 66 5 6292
sister chromatid segregation 8.1487E-10 6 69 5 6292
mitosis 6.6367E-9 6 104 5 6292
nuclear division 7.3116E-9 6 106 5 6292
M phase 9.9104E-9 6 294 6 6292
organelle fission 1.0118E-8 6 113 5 6292
M phase of mitotic cell cycle 1.9032E-8 6 128 5 6292
cell cycle phase 4.3855E-8 6 376 6 6292
cell cycle process 2.1684E-7 6 490 6 6292
cell cycle 3.2871E-7 6 525 6 6292
chromosome organization 4.595E-7 6 555 6 6292
mitotic cell cycle 6.1071E-7 6 255 5 6292
organelle organization 3.2663E-5 6 1127 6 6292
cellular component organization 2.5085E-4 6 1582 6 6292
double-strand break repair 1.1817E-3 6 57 2 6292
spore germination 1.9064E-3 6 2 1 6292
cytogamy 5.7102E-3 6 6 1 6292
reproductive process in single-celled organism 6.3845E-3 6 134 2 6292
synaptonemal complex assembly 6.6592E-3 6 7 1 6292
synaptonemal complex organization 6.6592E-3 6 7 1 6292
M phase of meiotic cell cycle 9.0126E-3 6 160 2 6292
meiosis 9.0126E-3 6 160 2 6292
meiotic cell cycle 9.4541E-3 6 164 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

AT DNA binding 2.8585E-3 6 3 1 6292
DNA secondary structure binding 8.5551E-3 6 9 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle