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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear membrane-endoplasmic reticulum network 3.9627E-3 3 232 2 6292
microsome 9.5071E-3 3 20 1 6292
vesicular fraction 9.5071E-3 3 20 1 6292
endoplasmic reticulum 9.6301E-3 3 364 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ER-associated protein catabolic process 1.1188E-4 3 39 2 6292
proteasomal protein catabolic process 3.5308E-4 3 69 2 6292
proteasomal ubiquitin-dependent protein catabolic process 3.5308E-4 3 69 2 6292
modification-dependent protein catabolic process 1.8027E-3 3 156 2 6292
ubiquitin-dependent protein catabolic process 1.8027E-3 3 156 2 6292
proteolysis involved in cellular protein catabolic process 1.8723E-3 3 159 2 6292
modification-dependent macromolecule catabolic process 1.9912E-3 3 164 2 6292
cellular protein catabolic process 2.1638E-3 3 171 2 6292
proteolysis 2.612E-3 3 188 2 6292
protein catabolic process 2.6396E-3 3 189 2 6292
cellular macromolecule catabolic process 5.1545E-3 3 265 2 6292
cell death 5.2364E-3 3 11 1 6292
apoptosis 5.2364E-3 3 11 1 6292
death 5.2364E-3 3 11 1 6292
programmed cell death 5.2364E-3 3 11 1 6292
macromolecule catabolic process 6.3267E-3 3 294 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle