| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 4 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| transcription factor TFIID complex | 4.3797E-8 | 4 | 15 | 3 | 6292 |
| DNA-directed RNA polymerase II, holoenzyme | 2.6552E-6 | 4 | 56 | 3 | 6292 |
| transcription factor complex | 5.4647E-6 | 4 | 71 | 3 | 6292 |
| nucleoplasm part | 2.2664E-4 | 4 | 245 | 3 | 6292 |
| nucleoplasm | 2.8316E-4 | 4 | 264 | 3 | 6292 |
| nuclear lumen | 1.404E-3 | 4 | 453 | 3 | 6292 |
| transcription factor TFIIIB complex | 1.9063E-3 | 4 | 3 | 1 | 6292 |
| organelle lumen | 4.2376E-3 | 4 | 660 | 3 | 6292 |
| intracellular organelle lumen | 4.2376E-3 | 4 | 660 | 3 | 6292 |
| membrane-enclosed lumen | 5.0309E-3 | 4 | 700 | 3 | 6292 |
| RNA polymerase I transcription factor complex | 5.7106E-3 | 4 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| general RNA polymerase II transcription factor activity | 3.987E-6 | 4 | 64 | 3 | 6292 |
| RNA polymerase II transcription factor activity | 3.3964E-5 | 4 | 130 | 3 | 6292 |
| transcription regulator activity | 5.9551E-4 | 4 | 339 | 3 | 6292 |
| protein homodimerization activity | 1.2712E-3 | 4 | 2 | 1 | 6292 |
| identical protein binding | 1.9063E-3 | 4 | 3 | 1 | 6292 |
| protein dimerization activity | 3.8098E-3 | 4 | 6 | 1 | 6292 |
| RNA polymerase I transcription factor activity | 6.3436E-3 | 4 | 10 | 1 | 6292 |
| RNA polymerase III transcription factor activity | 6.3436E-3 | 4 | 10 | 1 | 6292 |
| DNA bending activity | 8.2408E-3 | 4 | 13 | 1 | 6292 |