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Protein Overview: gi|15220009, gi|...

General Information:
Name(s) found: gi|5734759 [NCBI NR]
gi|25282661 [NCBI NR]
gi|15220009 [NCBI NR]
Description(s) found:
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  • gi|5734759|gb|AAD50024.1|AC007651_19 Similar to Cytochrome P450 [Arabidopsis thaliana] [NCBI NR]
  • pir||D86306 Similar to Cytochrome P450 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15220009|ref|NP_173149.1| CYP72C1 (CYTOCHROME P450 72C1); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding [Arabidopsis thaliana] [NCBI NR]
  • (Q9SHG5) Similar to cytochrome P450 [athaliana3702.FASTAC.txt]
  • Similar to Cytochrome P450 [Arabidopsis thaliana]gi|15220009|ref|NP_173149.1| cytochrome P450, putative [Arabidopsis thaliana]gi|25282661|pir||D86306 Similar to Cytochrome P450 [imported] - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Cytochrome P450 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SOB7, CYP72C1 | CYP72C1 (cytochrome P450, family 72, subfamily C, polypeptide 1); oxygen binding | chr1:5832275-5835248 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • CYP72C1; heme binding / iron ion binding / monooxygenase/ oxygen binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Similar to Cytochrome P450 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CYP72C1, SOB7 | cytochrome p450 72c1 | chr1:5832282-5835255 REVERSE LENGTH=476 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 476 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: unidimensional cell growth [IMP]
    brassinosteroid metabolic process [IMP]
    response to light stimulus [IGI]
    Molecular Function: oxygen binding [ISS]
    iron ion binding [IEA]
    electron carrier activity [IEA]
    monooxygenase activity [IEA]
    heme binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEIITVRKV FLIGFLILIL NWVWRAVNWV WLRPKRLEKY LKKQGFSGNS YRILMGDMRE  60
   61 SNQMDQVAHS LPLPLDADFL PRMMPFLHHT VLKHGKKCFT WYGPYPNVIV MDPETLREIM 120
  121 SKHELFPKPK IGSHNHVFLS GLLNHEGPKW SKHRSILNPA FRIDNLKSIL PAFNSSCKEM 180
  181 LEEWERLASA KGTMELDSWT HCHDLTRNML ARASFGDSYK DGIKIFEIQQ EQIDLGLLAI 240
  241 RAVYIPGSKF LPTKFNRRLR ETERDMRAMF KAMIETKEEE IKRGRAGQNV TSSLFVWTLV 300
  301 ALSQHQDWQN KARDEISQAF GNNEPDFEGL SHLKVVTMIL HEVLRLYSPA YFTCRITKQE 360
  361 VKLERFSLPE GVVVTIPMLL VHHDSDLWGD DVKEFKPERF ANGVAGATKG RLSFLPFSSG 420
  421 PRTCIGQNFS MLQAKLFLAM VLQRFSVELS PSYTHAPFPA ATTFPQHGAH LIIRKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..476] PSI-BLAST 84.69897 Crystal Structure of Human Microsomal P450 3A4

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • arachidonic acid monooxygenase activity
    		•  6.76823710927794 bayes_pls_golite062009
  • fatty acid (omega-1)-hydroxylase activity
    		•  6.3313834755701 bayes_pls_golite062009
  • arachidonic acid epoxygenase activity
    		•  4.80764258881036 bayes_pls_golite062009
  • monooxygenase activity
    		•  4.39701968168633 bayes_pls_golite062009
  • steroid hydroxylase activity
    		•  3.34643016685712 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  3.24344797738248 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
    		•  2.56821164444595 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.09151585300316 bayes_pls_golite062009
  • arachidonic acid 11,12-epoxygenase activity
    		•  2.0071742914584 bayes_pls_golite062009
  • retinoic acid 4-hydroxylase activity
    		•  1.90796041033974 bayes_pls_golite062009
  • oxygen binding
    		•  1.66120675703571 bayes_pls_golite062009
  • electron carrier activity
    		•  1.48516712188486 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen
    		•  1.20113920678403 bayes_pls_golite062009
  • retinoid binding
    		•  1.16961058051431 bayes_pls_golite062009
  • oxysterol 7-alpha-hydroxylase activity
    		•  1.13877300596184 bayes_pls_golite062009
  • binding
    		•  1.0881336564542 bayes_pls_golite062009
  • demethylase activity
    		•  1.0502020132476 bayes_pls_golite062009
  • isoprenoid binding
    		•  1.04601505165702 bayes_pls_golite062009
  • ecdysteroid 25-hydroxylase activity
    		•  0.89030345144459 bayes_pls_golite062009
  • flavonoid 3'-monooxygenase activity
    		•  0.89030345144459 bayes_pls_golite062009
  • retinoic acid binding
    		•  0.851040588981921 bayes_pls_golite062009
  • catalytic activity
    		•  0.608111453189583 bayes_pls_golite062009
  • steroid 17-alpha-monooxygenase activity
    		•  0.56337818662492 bayes_pls_golite062009
  • sterol 14-demethylase activity
    		•  0.510328098559181 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen
    		•  0.359684900320521 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle