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Protein Overview: CE12990

General Information:
Name(s) found: CE12990 [WormBase]
Description(s) found:
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  • WBGene00020151 status:Partially_confirmed UniProt:O16969 protein_id:CCD73116.1 [WormBase]
  • pir||T32196 hypothetical protein T01G6.1 - Caenorhabditis elegans [NCBI NR]
  • gi|17563726|ref|NP_503222.1| hypothetical protein T01G6.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|10864463|gb|AAG24176.1| Hypothetical protein T01G6.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE12990 WBGene00020151 dehydrogenase status:Partially_confirmed TR:O16969 protein_id:AAG24176.1 [wormpep150.fasta]
  • 12990 WBGene00020151 dehydrogenase status:Partially_confirmed TR:O16969 protein_id:AAG24176.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • short-chain reductase family member (5A975) [Caenorhabditis elegans]gi|10864463|gb|AAG24176.1| Hypothetical protein T01G6.1 [Caenorhabditis elegans]gi|7506885|pir||T32196 hypothetical protein T01G6.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • dehydrogenase status:Partially_confirmed TR:O16969 protein_id:AAG24176.1 [wormpep115.fasta.reversed]
  • CE12990 dehydrogenase status:Predicted TR:O16969 protein_id:AAG24176.1 [wormpep80.hongbin]
  • CE12990 WBGene00020151 dehydrogenase status:Partially_confirmed UniProt:O16969_CAEEL protein_id:AAG24176.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE12990 WBGene00020151 dehydrogenase status:Partially_confirmed UniProt:O16969_CAEEL protein_id:AAG24176.1| [wormORF-contam.fasta]
  • T01G6.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T01G6.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE12990 WBGene00020151 dehydrogenase status:Partially_confirmed UniProt:O16969 protein_id:AAG24176.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE12990 WBGene00020151 dehydrogenase status:Partially_confirmed UniProt:O16969 protein_id:CCD73116.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE12990 WBGene00020151 status:Partially_confirmed UniProt:O16969 protein_id:CCD73116.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_T01G6.1 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: estrogen biosynthetic process [IEALink to PubMed article]
    tetrahydrobiopterin biosynthetic process [IEALink to PubMed article]
    poly-hydroxybutyrate biosynthetic process [IEALink to PubMed article]
    metabolic process [IEALink to PubMed article]
    fatty acid biosynthetic process [IEALink to PubMed article]
    cellular metabolic process [IEALink to PubMed article]
    Molecular Function: estradiol 17-beta-dehydrogenase activity [IEALink to PubMed article]
    sepiapterin reductase activity [IEALink to PubMed article]
    coenzyme binding [IEALink to PubMed article]
    3-oxoacyl-[acyl-carrier-protein] reductase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]
    3-hydroxybutyrate dehydrogenase activity [IEALink to PubMed article]
    acetoacetyl-CoA reductase activity [IEALink to PubMed article]
    2-deoxy-D-gluconate 3-dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFAGKSVI ITGSSSGIGR ATAVLFAKNG AQVTITGRNA EKLEATKKKL LKVVKTPDSV  60
   61 NVVVANLTDA QGQDQIIQSA VKKFGKIDIL INNAGANVVD GTVNTDQSID LYHKTFQINF 120
  121 QAVVEMVKKT KKYLIESKGE IVNVSSIAAG PQAVSMSPYY AAAKAALNQY TRCVALDLIK 180
  181 QGVRVNSVSP GIIATNFMGA MGVPEQAQKK IVNLFASEKG CIPAGVPGKP EDIAELIVFL 240
  241 SDRKRSFYIV GQSIVADGGT SLISPMESQN LEDVMELGT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 62.69897 Crystal Structure of Short-Chain Dehydrogenase/Reductase of unknown Function from Caenorhabditis Elegans with Cofactor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  3.09625241707629 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  3.06391460989761 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  3.02758902218302 bayes_pls_golite062009
  • retinol dehydrogenase activity
    		•  2.50453100919665 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.01043991420942 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.84548524949714 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • steroid dehydrogenase activity
    		•  1.75109362865449 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.65338499044318 bayes_pls_golite062009
  • steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.55012034958204 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.47309297191111 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  1.248916824872 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  1.23679054027553 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.1634925015191 bayes_pls_golite062009
  • alcohol binding
    		•  1.07158175924364 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.01627645289834 bayes_pls_golite062009
  • binding
    		•  0.982999356179965 bayes_pls_golite062009
  • 7-beta-hydroxysteroid dehydrogenase (NADP+) activity
    		•  0.695969796208571 bayes_pls_golite062009
  • retinal dehydrogenase activity
    		•  0.69372321031969 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] reductase activity
    		•  0.604742541607263 bayes_pls_golite062009
  • 3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity
    		•  0.583772223704381 bayes_pls_golite062009
  • testosterone 17-beta-dehydrogenase activity
    		•  0.532187027260366 bayes_pls_golite062009
  • DNA binding
    		•  0.525227236870065 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.459537641913493 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.452476420854859 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.439912268968251 bayes_pls_golite062009
  • retinol binding
    		•  0.343379136183648 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.177044638410302 bayes_pls_golite062009
  • methylenetetrahydrofolate dehydrogenase activity
    		•  0.124826575912808 bayes_pls_golite062009
  • methenyltetrahydrofolate cyclohydrolase activity
    		•  0.118312276550651 bayes_pls_golite062009
  • ethanol binding
    		•  0.0448614072391299 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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