YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE12990
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFAGKSVI ITGSSSGIGR ATAVLFAKNG AQVTITGRNA EKLEATKKKL LKVVKTPDSV  60
   61 NVVVANLTDA QGQDQIIQSA VKKFGKIDIL INNAGANVVD GTVNTDQSID LYHKTFQINF 120
  121 QAVVEMVKKT KKYLIESKGE IVNVSSIAAG PQAVSMSPYY AAAKAALNQY TRCVALDLIK 180
  181 QGVRVNSVSP GIIATNFMGA MGVPEQAQKK IVNLFASEKG CIPAGVPGKP EDIAELIVFL 240
  241 SDRKRSFYIV GQSIVADGGT SLISPMESQN LEDVMELGT

Type	Start	End	Confidence
Signal Peptide	1	23	0.69
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	279	0.99