Protein Overview: gi|149048707, gi...

General Information:
Name(s) found:	gi\|62643333 [NCBI NR] gi\|157821697 [NCBI NR] gi\|149048707 [NCBI NR] gi\|109466507 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|62643333\|ref\|XP_574919.1\| PREDICTED: similar to Transcription factor SOX-2 [Rattus norvegicus] [NCBI NR] gi\|157821697\|ref\|NP_001102651.1\| SRY (sex determining region Y)-box 2 [Rattus norvegicus] [NCBI NR] gi\|149048707\|gb\|EDM01248.1\| rCG41622 [Rattus norvegicus] [NCBI NR] gi\|109466507\|ref\|XP_001067354.1\| PREDICTED: similar to Transcription factor SOX-2 [Rattus norvegicus] [NCBI NR] Ensembl_locations(Chr-bp):2-111285305 [hmr_yeast5_DM3-1_pombe.fasta] Tax_Id=10116 PREDICTED: similar to SOX2 protein [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 34 kDa protein [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta] SRY-box containing gene 2 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] rCG41622 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 34KDA PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] SRY (sex determining region Y)-box 2 [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta] PREDICTED: similar to Transcription factor SOX-2 [Rattus norvegicus] [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Sox2 SRY (sex determining region Y)-box 2 [rat-ipi-250309-contam.fasta] RCG41622 OS=Rattus norvegicus GN=Sox2 [011711_HMR.fasta] RCG41622 OS=Rattus norvegicus GN=Sox2 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta] Protein Sox2 OS=Rattus norvegicus GN=Sox2 PE=4 SV=1 [Aridor_1205.fasta]
Organism:	Rattus norvegicus
Length:	319 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA] transcription factor complex [UNKNOWN] cytoplasm [UNKNOWN] cytosol [UNKNOWN] cellular_component [ND]
Biological Process:	cell cycle arrest [UNKNOWN] branching involved in lung morphogenesis [UNKNOWN] inner ear development [UNKNOWN] response to growth factor stimulus [UNKNOWN] forebrain neuron differentiation [UNKNOWN] retina morphogenesis in camera-type eye [UNKNOWN] tongue development [UNKNOWN] sensory perception of sound [UNKNOWN] lung alveolus development [UNKNOWN] response to retinoic acid [UNKNOWN] forebrain development [UNKNOWN] cell fate specification [UNKNOWN] detection of mechanical stimulus involved in sensory perception of sound [UNKNOWN] biological_process [ND] stem cell maintenance [UNKNOWN] adenohypophysis development [UNKNOWN] positive regulation of neuroblast proliferation [UNKNOWN] response to chemical stimulus [UNKNOWN] anatomical structure formation involved in morphogenesis [UNKNOWN] embryonic organ development [UNKNOWN] cerebral cortex development [UNKNOWN] pigment biosynthetic process [UNKNOWN] lens induction in camera-type eye [UNKNOWN] pituitary gland development [UNKNOWN] regulation of caspase activity [UNKNOWN] diencephalon morphogenesis [UNKNOWN] male genitalia development [UNKNOWN] positive regulation of epithelial cell differentiation [UNKNOWN] inner ear morphogenesis [UNKNOWN] negative regulation of epithelial cell proliferation [UNKNOWN] regulation of gene expression [UNKNOWN] negative regulation of Wnt receptor signaling pathway [UNKNOWN] response to wounding [UNKNOWN] negative regulation of neuron differentiation [UNKNOWN] positive regulation of neuron differentiation [UNKNOWN] positive regulation of transcription [UNKNOWN] positive regulation of transcription from RNA polymerase II promoter [UNKNOWN] positive regulation of Notch signaling pathway [UNKNOWN] negative regulation of osteoblast differentiation [UNKNOWN] negative regulation of transcription from RNA polymerase II promoter [UNKNOWN] negative regulation of cell differentiation [UNKNOWN] neuron fate commitment [UNKNOWN] osteoblast differentiation [UNKNOWN] somatic stem cell maintenance [UNKNOWN] detection of mechanical stimulus involved in equilibrioception [UNKNOWN] regulation of transcription, DNA-dependent [UNKNOWN] positive regulation of MAPKKK cascade [UNKNOWN] olfactory placode formation [UNKNOWN] negative regulation of Wnt receptor signaling pathway through beta-catenin [UNKNOWN] eye development [UNKNOWN] cell fate commitment [UNKNOWN]
Molecular Function:	miRNA binding [UNKNOWN] DNA binding [UNKNOWN][IEA] transcription factor activity [UNKNOWN] protein binding [UNKNOWN] sequence-specific DNA binding [UNKNOWN] chromatin binding [UNKNOWN] promoter binding [UNKNOWN] molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNMMETELK PPGPQQASGG GGGGGNATAA ATGGNQKNSP DRVKRPMNAF MVWSRGQRRK  60
   61 MAQENPKMHN SEISKRLGAE WKLLSETEKR PFIDEAKRLR ALHMKEHPDY KYRPRRKTKT 120
  121 LMKKDKYTLP GGLLAPGGNS MASGVGVGAG LGAGVNQRMD SYAHMNGWSN GSYSMMQEQL 180
  181 GYPQHPGLNA HGAAQMQPMH RYDVSALQYN SMTSSQTYMN GSPTYSMSYS QQGTPGMALG 240
  241 SMGSVVKSEA SSSPPVVTSS SHSRAPCQAG DLRDMISMYL PGAEVPEPAA PSRLHMAQHY 300
  301 QSGPVPGTAI NGTLPLSHM

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.83

Protein Overview: gi|149048707, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: