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Protein Overview: KAR9

General Information:
Name(s) found: KAR9 / YPL269W [SGD]
Description(s) found:
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  • gi|6324986|ref|NP_015054.1| Karyogamy protein required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules, localizes at the shmoo tip in mating cells and at the tip of the growing bud in small-budded cells through an [NCBI NR]
  • gi|51013863|gb|AAT93225.1| YPL269W [Saccharomyces cerevisiae] [NCBI NR]
  • gi|3915748|sp|P32526.2|KAR9_YEAST RecName: Full=Karyogamy protein KAR9; AltName: Full=Cortical protein KAR9 [NCBI NR]
  • gi|2772942|gb|AAB96652.1| cortical protein Kar9p [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S65302 hypothetical protein YPL269w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1370555|emb|CAA98005.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • Karyogamy protein KAR9 OS=Saccharomyces cerevisiae GN=KAR9 PE=1 SV=2 [Swiss-Prot]
  • KAR9 Cortical protein required for cytoplasmic microtubule orientation and nuclear migration [mips]
  • Karyogamy protein required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules, localizes at the shmoo tip in mating cells and at the tip of the growing bud in small-budded cells through anaphase [SGD]
  • (P32526) Karyogamy protein KAR9 (Cortical protein KAR9) [4932.FASTACCERV.txt]
  • Chr XVI from 33013-34947 [hmr_yeast5_DM3-1_pombe.fasta]
  • KAR9, Chr XVI from 33013-34947 [yeast_orfs2]
  • KAR9 SGDID:S0006190, Chr XVI from 33013-34947, Verified ORF [yeastflysequest.fasta]
  • Kar9p [Saccharomyces cerevisiae]gi|51013863|gb|AAT93225.1| YPL269W [Saccharomyces cerevisiae]gi|1370555|emb|CAA98005.1| unnamed protein product [Saccharomyces cerevisiae]gi|3915748|sp|P32526|KAR9_YEAST Karyogamy protein KAR9 (Cortical protein KAR9)gi| [nrdb_11152004_Chlamydomonas]
  • KAR9 SGDID:S000006190, Chr XVI from 33013-34947, Verified ORF, "Karyogamy protein required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules, localizes at the shmoo tip in mating cells and at the tip of the growing [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • Karyogamy protein KAR9 (Cortical protein KAR9) [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • YPL269W [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • cortical protein Kar9p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Karyogamy protein required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules, localizes at the shmoo tip in mating cells and at the tip of the growing bud in small-budded cells through anaphase; Kar9p [Saccharomyces [nr-271106-contam.fasta]
  • KAR9 SGDID:S000006190, Chr XVI from 33013-34947, Verified ORF, "Karyogamy protein required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules, localizes at the shmoo tip in mating cells and at the tip of the growing bud in small-budded cells through anaphase" [yeast-bovrabprots.fasta]
  • [chemostatdb.fasta]
  • Karyogamy protein KAR9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KAR9 PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • KAR9 SGDID:S000006190, Chr XVI from 33013-34947, Genome Release 64-1-1, Verified ORF, "Karyogamy protein required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules, localizes at the shmoo tip in mating cells and at the tip of the growing bud in small-budded cells through anaphase" [yeast-030211-contam.fasta]
  • KAR9 SGDID:S000006190, Chr XVI from 33013-34947, Genome Release 64-2-1, Verified ORF, "Karyogamy protein; required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules; localizes at the shmoo tip in mating cells and at the tip of the growing bud in small-budded cells through anaphase" [20141208_orf_trans.fasta]
  • YPL269W SGDID:S000006190, Chr XVI from 33013-34947, Genome Release 64-1-1, Verified ORF, "Karyogamy protein required for correct positioning of the mitotic spindle and for orienting cytoplasmic microtubules, localizes at the shmoo tip in mating cells and at the tip of the growing bud in small-budded cells through anaphase" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 644 amino acids

    Gene Ontology:
    Cellular Component: cell cortex [IDALink to PubMed article]
    mating projection tip [IDALink to PubMed article]
    Biological Process: nuclear migration along microtubule [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNDGPRSMT IGDDFQENFC ERLERIHNTL HSINDCNSLN ESTTSISETL LVQFYDDLEN  60
   61 VASVIPDLVN KKRLGKDDIL LFMDWLLLKK YMLYQFISDV HNIEEGFAHL LDLLEDEFSK 120
  121 DDQDSDKYNR FSPMFDVIEE STQIKTQLEP WLTNLKELLD TSLEFNEISK DHMDTLHKII 180
  181 NSNISYCLEI QEERFASPIR HTPSFTLEQL VKLLGTHTET TEPKVPKFSP AEDILSRKFL 240
  241 NLKKNIPPIE KSLTDILPQR IVQFGHRNIT NITTLQTILQ KKYELIMKDY RFMNSEFREL 300
  301 KVELIDKRWN ILFINLNHEL LYILDEIERL QSKLLTTKYT KDITIRLERQ LERKSKTVSK 360
  361 TFNIIYRALE FSLLDAGVAS KTNELAQRWL NIKPTADKIL IKSSASNKIA TSKKKIPKPK 420
  421 SLGFGRPNSV IGTITQDFQE RVAINEGDSN KTPENSTTVA LKGKKLGKAL LQKMNIKPAT 480
  481 SPNSSNAINP FFDPESPNKG KLILSSVPPL PYDETDETTL RVSRGENEKS PDSFITSRHE 540
  541 NKVQITETPL MAKNKSVLDI EKDKWNHYRS LPSRIPIYKD KVVKVTVENT PIAKVFQTPP 600
  601 TKITTPNSQV WVPSTRRRTR LRPPTPLSQL LSPREGRLDK TPTY

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) BIK1 KAR3 KAR9 NUF2 SGO1 STU1 STU2 TID3

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run BIM1 No Comments Cheeseman IM, et al. (2002)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen DUN1 KAR9 2 Unpublished Fields Lab Data
    View Screen RGD2 KAR9 2 Unpublished Fields Lab Data
    View Screen TOS3 KAR9 2 Unpublished Fields Lab Data
    View Screen DCN1 KAR9 2 Unpublished Fields Lab Data
    View Screen YMR057C KAR9 2 Unpublished Fields Lab Data
    View Screen MPC54 KAR9 2 Unpublished Fields Lab Data
    View Screen CLB5 KAR9 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data KAR9 and SPC42 Huh WK, et al. (2003)
    View Data KAR9 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] deduced N/A No confident structure predictions are available.
    2 View Details [342..644] MSA 1.002852 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytoskeletal protein binding
    		•  5.50691080671938 bayes_pls_golite062009
  • actin binding
    		•  5.20020808032372 bayes_pls_golite062009
  • actin filament binding
    		•  4.56724410384698 bayes_pls_golite062009
  • tubulin binding
    		•  3.64804975825589 bayes_pls_golite062009
  • microtubule binding
    		•  3.62999428181677 bayes_pls_golite062009
  • binding
    		•  2.3468119246528 bayes_pls_golite062009
  • protein binding
    		•  2.03402581943916 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  1.75895219767628 bayes_pls_golite062009
  • integrin binding
    		•  0.634559226589946 bayes_pls_golite062009
  • structural constituent of muscle
    		•  0.502792536769221 bayes_pls_golite062009
  • SNARE binding
    		•  0.309596137075689 bayes_pls_golite062009
  • protein complex binding
    		•  0.180823251423251 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle